Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.13□□□□□ -1.75
CASP4P49662 SUMO2P20-201ENST00000520803 283 ntBASIC4.13□□□□□ -1.75
CASP4P49662 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.13□□□□□ -1.75
CASP4P49662 TOMM20P2-201ENST00000540082 421 ntBASIC4.13□□□□□ -1.75
CASP4P49662 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.13□□□□□ -1.75
CASP4P49662 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.13□□□□□ -1.75
CASP4P49662 AC087499.8-201ENST00000578406 226 ntBASIC4.13□□□□□ -1.75
CASP4P49662 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.13□□□□□ -1.75
CASP4P49662 MIR7973-1-201ENST00000614683 76 ntBASIC4.13□□□□□ -1.75
CASP4P49662 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.13□□□□□ -1.75
CASP4P49662 RMST_9.1-201ENST00000619945 193 ntBASIC4.13□□□□□ -1.75
CASP4P49662 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CASP4P49662 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CASP4P49662 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.13□□□□□ -1.75
CASP4P49662 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CASP4P49662 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CASP4P49662 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CASP4P49662 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CASP4P49662 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.12□□□□□ -1.75
CASP4P49662 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CASP4P49662 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
CASP4P49662 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CASP4P49662 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CASP4P49662 RNU1-89P-201ENST00000384592 164 ntBASIC4.12□□□□□ -1.75
CASP4P49662 HMGN2P8-201ENST00000391458 268 ntBASIC4.12□□□□□ -1.75
CASP4P49662 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CASP4P49662 AL139247.1-201ENST00000422768 325 ntBASIC4.12□□□□□ -1.75
CASP4P49662 OR5AW1P-201ENST00000426334 1006 ntBASIC4.12□□□□□ -1.75
CASP4P49662 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.12□□□□□ -1.75
CASP4P49662 RPL7P2-201ENST00000427639 268 ntBASIC4.12□□□□□ -1.75
CASP4P49662 IFNNP1-201ENST00000429219 553 ntBASIC4.12□□□□□ -1.75
CASP4P49662 MTCO1P52-201ENST00000433928 531 ntBASIC4.12□□□□□ -1.75
CASP4P49662 MTND2P21-201ENST00000436242 1042 ntBASIC4.12□□□□□ -1.75
CASP4P49662 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.12□□□□□ -1.75
CASP4P49662 RPL34P26-201ENST00000445636 354 ntBASIC4.12□□□□□ -1.75
CASP4P49662 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CASP4P49662 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.12□□□□□ -1.75
CASP4P49662 AC008802.1-201ENST00000519121 791 ntBASIC4.12□□□□□ -1.75
CASP4P49662 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.12□□□□□ -1.75
CASP4P49662 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.12□□□□□ -1.75
CASP4P49662 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.12□□□□□ -1.75
CASP4P49662 HSPE1P5-201ENST00000561489 272 ntBASIC4.12□□□□□ -1.75
CASP4P49662 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.12□□□□□ -1.75
CASP4P49662 MIR548Y-201ENST00000582739 110 ntBASIC4.12□□□□□ -1.75
CASP4P49662 EIF1P6-201ENST00000600054 334 ntBASIC4.12□□□□□ -1.75
CASP4P49662 AC242628.1-201ENST00000606810 391 ntBASIC4.12□□□□□ -1.75
CASP4P49662 AC243654.2-201ENST00000612843 443 ntBASIC4.12□□□□□ -1.75
CASP4P49662 AC123768.4-201ENST00000616244 701 ntBASIC4.12□□□□□ -1.75
CASP4P49662 AC103858.2-201ENST00000621471 543 ntBASIC4.12□□□□□ -1.75
CASP4P49662 AC000123.2-201ENST00000623124 461 ntBASIC4.12□□□□□ -1.75
CASP4P49662 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
CASP4P49662 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CASP4P49662 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CASP4P49662 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CASP4P49662 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CASP4P49662 AC017007.4-201ENST00000503353 1352 ntBASIC4.12□□□□□ -1.75
CASP4P49662 AC006504.1-201ENST00000562493 3666 ntBASIC4.11□□□□□ -1.75
CASP4P49662 MFSD8-236ENST00000641509 4050 ntBASIC4.11□□□□□ -1.75
CASP4P49662 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.11□□□□□ -1.75
CASP4P49662 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.11□□□□□ -1.75
CASP4P49662 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CASP4P49662 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CASP4P49662 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CASP4P49662 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CASP4P49662 SNORA62.2-201ENST00000364672 152 ntBASIC4.11□□□□□ -1.75
CASP4P49662 SNORA57.1-201ENST00000391227 145 ntBASIC4.11□□□□□ -1.75
CASP4P49662 ATP5F1P4-201ENST00000397288 746 ntBASIC4.11□□□□□ -1.75
CASP4P49662 RPL31P52-201ENST00000407532 367 ntBASIC4.11□□□□□ -1.75
CASP4P49662 SNORA3.3-201ENST00000408712 125 ntBASIC4.11□□□□□ -1.75
CASP4P49662 RNA5SP239-201ENST00000410218 129 ntBASIC4.11□□□□□ -1.75
CASP4P49662 AC092809.1-201ENST00000441469 474 ntBASIC4.11□□□□□ -1.75
CASP4P49662 AC104306.1-201ENST00000449702 371 ntBASIC4.11□□□□□ -1.75
CASP4P49662 AC098824.1-201ENST00000453565 980 ntBASIC4.11□□□□□ -1.75
CASP4P49662 AC010683.1-201ENST00000473673 378 ntBASIC4.11□□□□□ -1.75
CASP4P49662 AC107398.1-201ENST00000486904 505 ntBASIC4.11□□□□□ -1.75
CASP4P49662 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.11□□□□□ -1.75
CASP4P49662 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.11□□□□□ -1.75
CASP4P49662 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.11□□□□□ -1.75
CASP4P49662 NPM1P41-201ENST00000512920 831 ntBASIC4.11□□□□□ -1.75
CASP4P49662 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.11□□□□□ -1.75
CASP4P49662 AC007991.1-201ENST00000522680 631 ntBASIC4.11□□□□□ -1.75
CASP4P49662 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.11□□□□□ -1.75
CASP4P49662 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.11□□□□□ -1.75
CASP4P49662 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.11□□□□□ -1.75
CASP4P49662 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.11□□□□□ -1.75
CASP4P49662 MIR5685-201ENST00000579080 79 ntBASIC4.11□□□□□ -1.75
CASP4P49662 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.11□□□□□ -1.75
CASP4P49662 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.11□□□□□ -1.75
CASP4P49662 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.11□□□□□ -1.75
CASP4P49662 BX322635.1-201ENST00000605804 496 ntBASIC4.11□□□□□ -1.75
CASP4P49662 HMGB1P50-201ENST00000605814 607 ntBASIC4.11□□□□□ -1.75
CASP4P49662 AL354760.1-201ENST00000608357 643 ntBASIC4.11□□□□□ -1.75
CASP4P49662 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.11□□□□□ -1.75
CASP4P49662 AC110792.4-201ENST00000609843 298 ntBASIC4.11□□□□□ -1.75
CASP4P49662 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.11□□□□□ -1.75
CASP4P49662 AC099669.2-201ENST00000616549 437 ntBASIC4.11□□□□□ -1.75
CASP4P49662 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.11□□□□□ -1.75
CASP4P49662 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
CASP4P49662 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CASP4P49662 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms