Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.99□□□□□ -1.77
HMGCLP35914 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.99□□□□□ -1.77
HMGCLP35914 AC119674.1-212ENST00000641155 993 ntBASIC3.99□□□□□ -1.77
HMGCLP35914 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.99□□□□□ -1.77
HMGCLP35914 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.99□□□□□ -1.77
HMGCLP35914 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HMGCLP35914 ZNF962P-201ENST00000443465 3140 ntBASIC3.99□□□□□ -1.77
HMGCLP35914 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HMGCLP35914 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HMGCLP35914 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.98□□□□□ -1.77
HMGCLP35914 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HMGCLP35914 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
HMGCLP35914 MTCO1P14-201ENST00000441695 1559 ntBASIC3.98□□□□□ -1.77
HMGCLP35914 RNA5SP399-201ENST00000364003 117 ntBASIC3.98□□□□□ -1.77
HMGCLP35914 HMGB1P10-201ENST00000395823 563 ntBASIC3.98□□□□□ -1.77
HMGCLP35914 ATP5F1P6-201ENST00000402768 767 ntBASIC3.98□□□□□ -1.77
HMGCLP35914 RPL21P65-201ENST00000406094 466 ntBASIC3.98□□□□□ -1.77
HMGCLP35914 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.98□□□□□ -1.77
HMGCLP35914 RNU4-27P-201ENST00000410889 139 ntBASIC3.98□□□□□ -1.77
HMGCLP35914 AC010385.1-201ENST00000412374 256 ntBASIC3.98□□□□□ -1.77
HMGCLP35914 AC093698.1-201ENST00000423843 571 ntBASIC3.98□□□□□ -1.77
HMGCLP35914 AC004975.1-201ENST00000428733 208 ntBASIC3.98□□□□□ -1.77
HMGCLP35914 HIGD1AP4-201ENST00000430194 280 ntBASIC3.98□□□□□ -1.77
HMGCLP35914 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.98□□□□□ -1.77
HMGCLP35914 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.98□□□□□ -1.77
HMGCLP35914 AC083863.1-201ENST00000438811 231 ntBASIC3.98□□□□□ -1.77
HMGCLP35914 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.98□□□□□ -1.77
HMGCLP35914 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.98□□□□□ -1.77
HMGCLP35914 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HMGCLP35914 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.98□□□□□ -1.77
HMGCLP35914 AC107398.1-201ENST00000486904 505 ntBASIC3.98□□□□□ -1.77
HMGCLP35914 AC092902.1-201ENST00000486999 259 ntBASIC3.98□□□□□ -1.77
HMGCLP35914 RPL31P61-201ENST00000496160 376 ntBASIC3.98□□□□□ -1.77
HMGCLP35914 MTCO2P9-201ENST00000503214 694 ntBASIC3.98□□□□□ -1.77
HMGCLP35914 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HMGCLP35914 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
HMGCLP35914 AC121161.1-201ENST00000510606 652 ntBASIC3.98□□□□□ -1.77
HMGCLP35914 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.98□□□□□ -1.77
HMGCLP35914 AC108064.1-201ENST00000513791 460 ntBASIC3.98□□□□□ -1.77
HMGCLP35914 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.98□□□□□ -1.77
HMGCLP35914 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.98□□□□□ -1.77
HMGCLP35914 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.98□□□□□ -1.77
HMGCLP35914 AP003102.1-201ENST00000525638 661 ntBASIC3.98□□□□□ -1.77
HMGCLP35914 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.98□□□□□ -1.77
HMGCLP35914 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.98□□□□□ -1.77
HMGCLP35914 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.98□□□□□ -1.77
HMGCLP35914 YPEL5P3-201ENST00000547227 352 ntBASIC3.98□□□□□ -1.77
HMGCLP35914 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.98□□□□□ -1.77
HMGCLP35914 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.98□□□□□ -1.77
HMGCLP35914 GNRHR2P1-201ENST00000555315 631 ntBASIC3.98□□□□□ -1.77
HMGCLP35914 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.98□□□□□ -1.77
HMGCLP35914 AC007224.1-201ENST00000564410 144 ntBASIC3.98□□□□□ -1.77
HMGCLP35914 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.98□□□□□ -1.77
HMGCLP35914 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.98□□□□□ -1.77
HMGCLP35914 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.98□□□□□ -1.77
HMGCLP35914 DNAJC19P3-201ENST00000594491 331 ntBASIC3.98□□□□□ -1.77
HMGCLP35914 BNIP3P19-201ENST00000605397 577 ntBASIC3.98□□□□□ -1.77
HMGCLP35914 HMGB1P50-201ENST00000605814 607 ntBASIC3.98□□□□□ -1.77
HMGCLP35914 AC012557.1-201ENST00000607115 611 ntBASIC3.98□□□□□ -1.77
HMGCLP35914 AC011374.2-201ENST00000607135 526 ntBASIC3.98□□□□□ -1.77
HMGCLP35914 AP000255.1-201ENST00000610276 676 ntBASIC3.98□□□□□ -1.77
HMGCLP35914 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.98□□□□□ -1.77
HMGCLP35914 RNA5SP196-201ENST00000625967 102 ntBASIC3.98□□□□□ -1.77
HMGCLP35914 AC106858.1-201ENST00000637497 429 ntBASIC3.98□□□□□ -1.77
HMGCLP35914 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HMGCLP35914 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HMGCLP35914 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.98□□□□□ -1.77
HMGCLP35914 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.98□□□□□ -1.77
HMGCLP35914 AC090229.1-201ENST00000590983 1609 ntBASIC3.98□□□□□ -1.77
HMGCLP35914 FAM35DP-201ENST00000323387 2712 ntBASIC3.98□□□□□ -1.77
HMGCLP35914 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HMGCLP35914 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HMGCLP35914 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HMGCLP35914 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HMGCLP35914 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
HMGCLP35914 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HMGCLP35914 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.97□□□□□ -1.77
HMGCLP35914 CASC19-284ENST00000642142 1868 ntBASIC3.97□□□□□ -1.77
HMGCLP35914 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
HMGCLP35914 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HMGCLP35914 SPRR2C-201ENST00000290702 219 ntBASIC3.97□□□□□ -1.77
HMGCLP35914 RNU6-304P-201ENST00000364855 107 ntBASIC3.97□□□□□ -1.77
HMGCLP35914 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
HMGCLP35914 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.97□□□□□ -1.77
HMGCLP35914 RNU2-17P-201ENST00000410290 190 ntBASIC3.97□□□□□ -1.77
HMGCLP35914 RNU4-6P-201ENST00000410804 122 ntBASIC3.97□□□□□ -1.77
HMGCLP35914 AMD1P2-201ENST00000412936 992 ntBASIC3.97□□□□□ -1.77
HMGCLP35914 RPL7AP73-201ENST00000413490 353 ntBASIC3.97□□□□□ -1.77
HMGCLP35914 XKRYP4-201ENST00000414395 483 ntBASIC3.97□□□□□ -1.77
HMGCLP35914 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.97□□□□□ -1.77
HMGCLP35914 VN1R42P-201ENST00000424651 344 ntBASIC3.97□□□□□ -1.77
HMGCLP35914 RPS6P14-201ENST00000425165 719 ntBASIC3.97□□□□□ -1.77
HMGCLP35914 MTCO1P52-201ENST00000433928 531 ntBASIC3.97□□□□□ -1.77
HMGCLP35914 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.97□□□□□ -1.77
HMGCLP35914 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.97□□□□□ -1.77
HMGCLP35914 TPTE2P3-201ENST00000441562 1189 ntBASIC3.97□□□□□ -1.77
HMGCLP35914 VN1R25P-201ENST00000443385 738 ntBASIC3.97□□□□□ -1.77
HMGCLP35914 MOB1AP2-201ENST00000446060 614 ntBASIC3.97□□□□□ -1.77
HMGCLP35914 XKRYP5-201ENST00000449659 483 ntBASIC3.97□□□□□ -1.77
HMGCLP35914 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms