Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
CIITAP33076 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CIITAP33076 ZNF876P-202ENST00000398732 1485 ntBASIC4.94□□□□□ -1.62
CIITAP33076 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CIITAP33076 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CIITAP33076 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CIITAP33076 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CIITAP33076 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CIITAP33076 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CIITAP33076 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.94□□□□□ -1.62
CIITAP33076 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.94□□□□□ -1.62
CIITAP33076 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CIITAP33076 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CIITAP33076 RNU6-353P-201ENST00000364266 108 ntBASIC4.94□□□□□ -1.62
CIITAP33076 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
CIITAP33076 RNU6-317P-201ENST00000384031 107 ntBASIC4.94□□□□□ -1.62
CIITAP33076 RNU6-224P-201ENST00000384055 107 ntBASIC4.94□□□□□ -1.62
CIITAP33076 RNU6-146P-201ENST00000384602 108 ntBASIC4.94□□□□□ -1.62
CIITAP33076 AC097374.1-203ENST00000400783 485 ntBASIC4.94□□□□□ -1.62
CIITAP33076 RPS20P14-201ENST00000412545 360 ntBASIC4.94□□□□□ -1.62
CIITAP33076 CEACAMP8-201ENST00000413902 580 ntBASIC4.94□□□□□ -1.62
CIITAP33076 BTF3P8-201ENST00000414577 526 ntBASIC4.94□□□□□ -1.62
CIITAP33076 UBTFL3-201ENST00000418934 1024 ntBASIC4.94□□□□□ -1.62
CIITAP33076 AC246680.2-201ENST00000422106 389 ntBASIC4.94□□□□□ -1.62
CIITAP33076 AL365338.1-201ENST00000422282 858 ntBASIC4.94□□□□□ -1.62
CIITAP33076 NPM1P24-201ENST00000428039 894 ntBASIC4.94□□□□□ -1.62
CIITAP33076 HIGD1AP4-201ENST00000430194 280 ntBASIC4.94□□□□□ -1.62
CIITAP33076 AL132765.1-201ENST00000434165 553 ntBASIC4.94□□□□□ -1.62
CIITAP33076 AC073143.1-201ENST00000436316 395 ntBASIC4.94□□□□□ -1.62
CIITAP33076 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.94□□□□□ -1.62
CIITAP33076 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.94□□□□□ -1.62
CIITAP33076 RPL23AP52-201ENST00000439311 478 ntBASIC4.94□□□□□ -1.62
CIITAP33076 CBX1P4-201ENST00000439415 457 ntBASIC4.94□□□□□ -1.62
CIITAP33076 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.94□□□□□ -1.62
CIITAP33076 Z99714.1-201ENST00000450463 807 ntBASIC4.94□□□□□ -1.62
CIITAP33076 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.94□□□□□ -1.62
CIITAP33076 RNU7-140P-201ENST00000459546 60 ntBASIC4.94□□□□□ -1.62
CIITAP33076 UBTFL6-201ENST00000477929 1024 ntBASIC4.94□□□□□ -1.62
CIITAP33076 MTND6P6-201ENST00000478031 263 ntBASIC4.94□□□□□ -1.62
CIITAP33076 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.94□□□□□ -1.62
CIITAP33076 HPRT1P2-201ENST00000505250 544 ntBASIC4.94□□□□□ -1.62
CIITAP33076 AC105313.1-201ENST00000509121 353 ntBASIC4.94□□□□□ -1.62
CIITAP33076 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.94□□□□□ -1.62
CIITAP33076 AC007834.2-201ENST00000536310 343 ntBASIC4.94□□□□□ -1.62
CIITAP33076 OSBPL9P5-201ENST00000542581 171 ntBASIC4.94□□□□□ -1.62
CIITAP33076 POLR2KP1-201ENST00000553226 168 ntBASIC4.94□□□□□ -1.62
CIITAP33076 PSMB7P1-201ENST00000556349 514 ntBASIC4.94□□□□□ -1.62
CIITAP33076 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.94□□□□□ -1.62
CIITAP33076 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CIITAP33076 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.94□□□□□ -1.62
CIITAP33076 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.94□□□□□ -1.62
CIITAP33076 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC4.94□□□□□ -1.62
CIITAP33076 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
CIITAP33076 MIR3138-201ENST00000585238 82 ntBASIC4.94□□□□□ -1.62
CIITAP33076 ELOCP28-201ENST00000590044 317 ntBASIC4.94□□□□□ -1.62
CIITAP33076 ZNF92P3-201ENST00000596594 954 ntBASIC4.94□□□□□ -1.62
CIITAP33076 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.94□□□□□ -1.62
CIITAP33076 Z98200.1-201ENST00000607298 470 ntBASIC4.94□□□□□ -1.62
CIITAP33076 AC243654.2-201ENST00000612843 443 ntBASIC4.94□□□□□ -1.62
CIITAP33076 AC083809.1-201ENST00000615051 472 ntBASIC4.94□□□□□ -1.62
CIITAP33076 AC007546.1-201ENST00000619452 559 ntBASIC4.94□□□□□ -1.62
CIITAP33076 MIR6810-201ENST00000622701 70 ntBASIC4.94□□□□□ -1.62
CIITAP33076 AC079416.3-201ENST00000624479 549 ntBASIC4.94□□□□□ -1.62
CIITAP33076 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.94□□□□□ -1.62
CIITAP33076 AP003399.1-201ENST00000637534 361 ntBASIC4.94□□□□□ -1.62
CIITAP33076 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.94□□□□□ -1.62
CIITAP33076 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CIITAP33076 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CIITAP33076 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CIITAP33076 AC104118.1-201ENST00000607625 1589 ntBASIC4.94□□□□□ -1.62
CIITAP33076 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CIITAP33076 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CIITAP33076 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CIITAP33076 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CIITAP33076 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CIITAP33076 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.93□□□□□ -1.62
CIITAP33076 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.93□□□□□ -1.62
CIITAP33076 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CIITAP33076 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CIITAP33076 RNU1-20P-201ENST00000363314 162 ntBASIC4.93□□□□□ -1.62
CIITAP33076 RNU4-92P-201ENST00000363783 136 ntBASIC4.93□□□□□ -1.62
CIITAP33076 RNU1-132P-201ENST00000364300 164 ntBASIC4.93□□□□□ -1.62
CIITAP33076 AC068538.1-201ENST00000376856 336 ntBASIC4.93□□□□□ -1.62
CIITAP33076 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CIITAP33076 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.93□□□□□ -1.62
CIITAP33076 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.93□□□□□ -1.62
CIITAP33076 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.93□□□□□ -1.62
CIITAP33076 HMGB1P49-201ENST00000418882 569 ntBASIC4.93□□□□□ -1.62
CIITAP33076 AC027644.1-201ENST00000419595 298 ntBASIC4.93□□□□□ -1.62
CIITAP33076 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CIITAP33076 RPS20P1-201ENST00000434853 354 ntBASIC4.93□□□□□ -1.62
CIITAP33076 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.93□□□□□ -1.62
CIITAP33076 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CIITAP33076 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.93□□□□□ -1.62
CIITAP33076 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.93□□□□□ -1.62
CIITAP33076 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CIITAP33076 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.93□□□□□ -1.62
CIITAP33076 AC005410.1-202ENST00000460347 485 ntBASIC4.93□□□□□ -1.62
CIITAP33076 RPS23P7-201ENST00000466210 444 ntBASIC4.93□□□□□ -1.62
CIITAP33076 CCDC75P1-201ENST00000469247 791 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms