Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.28□□□□□ -1.72
CHRNA3P32297 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CHRNA3P32297 RNA5SP479-201ENST00000364858 117 ntBASIC4.28□□□□□ -1.72
CHRNA3P32297 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.28□□□□□ -1.72
CHRNA3P32297 MTATP6P31-201ENST00000406985 692 ntBASIC4.28□□□□□ -1.72
CHRNA3P32297 UBE2V1P11-201ENST00000411559 285 ntBASIC4.28□□□□□ -1.72
CHRNA3P32297 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CHRNA3P32297 AC114814.2-201ENST00000419195 485 ntBASIC4.28□□□□□ -1.72
CHRNA3P32297 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.28□□□□□ -1.72
CHRNA3P32297 MORF4L1P7-201ENST00000426038 703 ntBASIC4.28□□□□□ -1.72
CHRNA3P32297 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.28□□□□□ -1.72
CHRNA3P32297 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC4.28□□□□□ -1.72
CHRNA3P32297 AC096638.2-201ENST00000434965 711 ntBASIC4.28□□□□□ -1.72
CHRNA3P32297 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.28□□□□□ -1.72
CHRNA3P32297 AC105402.2-201ENST00000438503 358 ntBASIC4.28□□□□□ -1.72
CHRNA3P32297 RPL23AP46-201ENST00000438548 490 ntBASIC4.28□□□□□ -1.72
CHRNA3P32297 AF228730.2-201ENST00000438784 848 ntBASIC4.28□□□□□ -1.72
CHRNA3P32297 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.28□□□□□ -1.72
CHRNA3P32297 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.28□□□□□ -1.72
CHRNA3P32297 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.28□□□□□ -1.72
CHRNA3P32297 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4.28□□□□□ -1.72
CHRNA3P32297 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.28□□□□□ -1.72
CHRNA3P32297 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CHRNA3P32297 MIR2116-201ENST00000517221 80 ntBASIC4.28□□□□□ -1.72
CHRNA3P32297 OR5AK3P-201ENST00000527486 1297 ntBASIC4.28□□□□□ -1.72
CHRNA3P32297 GNRHR2P1-201ENST00000555315 631 ntBASIC4.28□□□□□ -1.72
CHRNA3P32297 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.28□□□□□ -1.72
CHRNA3P32297 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.28□□□□□ -1.72
CHRNA3P32297 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.28□□□□□ -1.72
CHRNA3P32297 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC4.28□□□□□ -1.72
CHRNA3P32297 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.28□□□□□ -1.72
CHRNA3P32297 MIR3160-1-201ENST00000577972 85 ntBASIC4.28□□□□□ -1.72
CHRNA3P32297 RN7SL600P-201ENST00000581811 299 ntBASIC4.28□□□□□ -1.72
CHRNA3P32297 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.28□□□□□ -1.72
CHRNA3P32297 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CHRNA3P32297 MRPS35P3-201ENST00000603189 709 ntBASIC4.28□□□□□ -1.72
CHRNA3P32297 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.28□□□□□ -1.72
CHRNA3P32297 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.28□□□□□ -1.72
CHRNA3P32297 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.28□□□□□ -1.72
CHRNA3P32297 FRG1DP-201ENST00000635586 771 ntBASIC4.28□□□□□ -1.72
CHRNA3P32297 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CHRNA3P32297 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CHRNA3P32297 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CHRNA3P32297 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.28□□□□□ -1.72
CHRNA3P32297 DCAF13P3-201ENST00000561147 1334 ntBASIC4.27□□□□□ -1.73
CHRNA3P32297 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CHRNA3P32297 AC138393.1-206ENST00000540997 1886 ntBASIC4.27□□□□□ -1.73
CHRNA3P32297 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CHRNA3P32297 UBE2V1P15-201ENST00000407776 448 ntBASIC4.27□□□□□ -1.73
CHRNA3P32297 RNA5SP317-201ENST00000410176 116 ntBASIC4.27□□□□□ -1.73
CHRNA3P32297 RN7SKP56-201ENST00000410513 331 ntBASIC4.27□□□□□ -1.73
CHRNA3P32297 RNA5SP311-201ENST00000411290 116 ntBASIC4.27□□□□□ -1.73
CHRNA3P32297 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.27□□□□□ -1.73
CHRNA3P32297 RPS12P5-201ENST00000423449 371 ntBASIC4.27□□□□□ -1.73
CHRNA3P32297 USP12PY-201ENST00000427677 1064 ntBASIC4.27□□□□□ -1.73
CHRNA3P32297 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.27□□□□□ -1.73
CHRNA3P32297 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.27□□□□□ -1.73
CHRNA3P32297 MTCO3P43-201ENST00000440974 771 ntBASIC4.27□□□□□ -1.73
CHRNA3P32297 VN1R25P-201ENST00000443385 738 ntBASIC4.27□□□□□ -1.73
CHRNA3P32297 VN1R40P-201ENST00000455196 941 ntBASIC4.27□□□□□ -1.73
CHRNA3P32297 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CHRNA3P32297 AL672167.3-201ENST00000465951 960 ntBASIC4.27□□□□□ -1.73
CHRNA3P32297 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.27□□□□□ -1.73
CHRNA3P32297 TRBV8-2-201ENST00000475637 270 ntBASIC4.27□□□□□ -1.73
CHRNA3P32297 RN7SL271P-201ENST00000487601 295 ntBASIC4.27□□□□□ -1.73
CHRNA3P32297 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.27□□□□□ -1.73
CHRNA3P32297 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CHRNA3P32297 COL6A4P2-205ENST00000509855 506 ntBASIC4.27□□□□□ -1.73
CHRNA3P32297 RNA5SP315-201ENST00000516340 116 ntBASIC4.27□□□□□ -1.73
CHRNA3P32297 RNU7-143P-201ENST00000516781 65 ntBASIC4.27□□□□□ -1.73
CHRNA3P32297 RNA5SP312-201ENST00000517068 116 ntBASIC4.27□□□□□ -1.73
CHRNA3P32297 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.27□□□□□ -1.73
CHRNA3P32297 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.27□□□□□ -1.73
CHRNA3P32297 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.27□□□□□ -1.73
CHRNA3P32297 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.27□□□□□ -1.73
CHRNA3P32297 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.27□□□□□ -1.73
CHRNA3P32297 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.27□□□□□ -1.73
CHRNA3P32297 RPL23AP87-202ENST00000573039 466 ntBASIC4.27□□□□□ -1.73
CHRNA3P32297 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.27□□□□□ -1.73
CHRNA3P32297 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.27□□□□□ -1.73
CHRNA3P32297 NTAN1P1-201ENST00000603150 646 ntBASIC4.27□□□□□ -1.73
CHRNA3P32297 AC005972.3-201ENST00000606304 481 ntBASIC4.27□□□□□ -1.73
CHRNA3P32297 HPVC1-201ENST00000629899 1198 ntBASIC4.27□□□□□ -1.73
CHRNA3P32297 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.27□□□□□ -1.73
CHRNA3P32297 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.27□□□□□ -1.73
CHRNA3P32297 MTND5P11-201ENST00000511037 1812 ntBASIC4.27□□□□□ -1.73
CHRNA3P32297 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CHRNA3P32297 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CHRNA3P32297 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CHRNA3P32297 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CHRNA3P32297 MAPK10-373ENST00000641983 6772 ntBASIC4.26□□□□□ -1.73
CHRNA3P32297 Z82217.1-201ENST00000625157 8149 ntBASIC4.26□□□□□ -1.73
CHRNA3P32297 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CHRNA3P32297 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.26□□□□□ -1.73
CHRNA3P32297 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
CHRNA3P32297 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHRNA3P32297 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
CHRNA3P32297 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.26□□□□□ -1.73
CHRNA3P32297 RNU1-89P-201ENST00000384592 164 ntBASIC4.26□□□□□ -1.73
CHRNA3P32297 MIR1193-201ENST00000408109 78 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms