Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC005412.1-201ENST00000580812 1049 ntBASIC3.86□□□□□ -1.79
SHC1P29353 AC069366.1-201ENST00000583159 838 ntBASIC3.86□□□□□ -1.79
SHC1P29353 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SHC1P29353 AC008751.2-201ENST00000597885 980 ntBASIC3.86□□□□□ -1.79
SHC1P29353 ARF4P1-201ENST00000605447 541 ntBASIC3.86□□□□□ -1.79
SHC1P29353 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.86□□□□□ -1.79
SHC1P29353 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
SHC1P29353 AC083809.1-201ENST00000615051 472 ntBASIC3.86□□□□□ -1.79
SHC1P29353 AC233309.1-201ENST00000619522 751 ntBASIC3.86□□□□□ -1.79
SHC1P29353 MIR6810-201ENST00000622701 70 ntBASIC3.86□□□□□ -1.79
SHC1P29353 AL356121.2-201ENST00000624715 780 ntBASIC3.86□□□□□ -1.79
SHC1P29353 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC3.86□□□□□ -1.79
SHC1P29353 OR52H1-202ENST00000641796 1061 ntBASIC3.86□□□□□ -1.79
SHC1P29353 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SHC1P29353 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SHC1P29353 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
SHC1P29353 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SHC1P29353 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.86□□□□□ -1.79
SHC1P29353 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SHC1P29353 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SHC1P29353 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SHC1P29353 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.85□□□□□ -1.79
SHC1P29353 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
SHC1P29353 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SHC1P29353 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.85□□□□□ -1.79
SHC1P29353 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
SHC1P29353 RNU1-14P-201ENST00000362759 152 ntBASIC3.85□□□□□ -1.79
SHC1P29353 SNORD56.4-201ENST00000363883 71 ntBASIC3.85□□□□□ -1.79
SHC1P29353 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.85□□□□□ -1.79
SHC1P29353 AL603865.2-201ENST00000401679 213 ntBASIC3.85□□□□□ -1.79
SHC1P29353 RPL26P37-201ENST00000411983 438 ntBASIC3.85□□□□□ -1.79
SHC1P29353 RPL23AP26-201ENST00000412728 464 ntBASIC3.85□□□□□ -1.79
SHC1P29353 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.85□□□□□ -1.79
SHC1P29353 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.85□□□□□ -1.79
SHC1P29353 RPL6P29-201ENST00000414863 865 ntBASIC3.85□□□□□ -1.79
SHC1P29353 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.85□□□□□ -1.79
SHC1P29353 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.85□□□□□ -1.79
SHC1P29353 MTCO3P21-201ENST00000430791 643 ntBASIC3.85□□□□□ -1.79
SHC1P29353 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.85□□□□□ -1.79
SHC1P29353 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.85□□□□□ -1.79
SHC1P29353 MTCYBP31-201ENST00000438855 1122 ntBASIC3.85□□□□□ -1.79
SHC1P29353 ACTR3P2-201ENST00000439585 1257 ntBASIC3.85□□□□□ -1.79
SHC1P29353 ELOCP10-201ENST00000440624 327 ntBASIC3.85□□□□□ -1.79
SHC1P29353 RPL6P5-201ENST00000445678 828 ntBASIC3.85□□□□□ -1.79
SHC1P29353 AL358794.1-201ENST00000445689 381 ntBASIC3.85□□□□□ -1.79
SHC1P29353 EIF4A1P11-201ENST00000451239 222 ntBASIC3.85□□□□□ -1.79
SHC1P29353 AC096992.1-201ENST00000459808 709 ntBASIC3.85□□□□□ -1.79
SHC1P29353 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.85□□□□□ -1.79
SHC1P29353 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.85□□□□□ -1.79
SHC1P29353 RPL23AP2-201ENST00000471227 466 ntBASIC3.85□□□□□ -1.79
SHC1P29353 RPS26P15-201ENST00000488067 348 ntBASIC3.85□□□□□ -1.79
SHC1P29353 RPL35P6-201ENST00000490024 372 ntBASIC3.85□□□□□ -1.79
SHC1P29353 AC104164.2-201ENST00000496953 495 ntBASIC3.85□□□□□ -1.79
SHC1P29353 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.85□□□□□ -1.79
SHC1P29353 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.85□□□□□ -1.79
SHC1P29353 AC025554.1-201ENST00000505641 188 ntBASIC3.85□□□□□ -1.79
SHC1P29353 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.85□□□□□ -1.79
SHC1P29353 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.85□□□□□ -1.79
SHC1P29353 AC017037.1-201ENST00000508460 471 ntBASIC3.85□□□□□ -1.79
SHC1P29353 PGBD4P4-201ENST00000509673 613 ntBASIC3.85□□□□□ -1.79
SHC1P29353 AC108471.1-201ENST00000513977 287 ntBASIC3.85□□□□□ -1.79
SHC1P29353 RNU6-311P-201ENST00000516224 102 ntBASIC3.85□□□□□ -1.79
SHC1P29353 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SHC1P29353 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.85□□□□□ -1.79
SHC1P29353 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.85□□□□□ -1.79
SHC1P29353 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.85□□□□□ -1.79
SHC1P29353 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.85□□□□□ -1.79
SHC1P29353 OR10V3P-201ENST00000525712 725 ntBASIC3.85□□□□□ -1.79
SHC1P29353 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.85□□□□□ -1.79
SHC1P29353 CYCSP29-201ENST00000533731 318 ntBASIC3.85□□□□□ -1.79
SHC1P29353 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.85□□□□□ -1.79
SHC1P29353 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.85□□□□□ -1.79
SHC1P29353 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.85□□□□□ -1.79
SHC1P29353 AL109766.1-201ENST00000555080 552 ntBASIC3.85□□□□□ -1.79
SHC1P29353 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.85□□□□□ -1.79
SHC1P29353 MIR3939-201ENST00000582614 106 ntBASIC3.85□□□□□ -1.79
SHC1P29353 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.85□□□□□ -1.79
SHC1P29353 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.85□□□□□ -1.79
SHC1P29353 AC245036.5-201ENST00000596330 847 ntBASIC3.85□□□□□ -1.79
SHC1P29353 NIFKP6-201ENST00000598115 845 ntBASIC3.85□□□□□ -1.79
SHC1P29353 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.85□□□□□ -1.79
SHC1P29353 ELOCP34-201ENST00000604436 327 ntBASIC3.85□□□□□ -1.79
SHC1P29353 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.85□□□□□ -1.79
SHC1P29353 AC005962.2-201ENST00000611427 652 ntBASIC3.85□□□□□ -1.79
SHC1P29353 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SHC1P29353 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.85□□□□□ -1.79
SHC1P29353 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.85□□□□□ -1.79
SHC1P29353 AC083865.1-201ENST00000636634 831 ntBASIC3.85□□□□□ -1.79
SHC1P29353 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
SHC1P29353 AC097504.1-201ENST00000515103 2415 ntBASIC3.85□□□□□ -1.79
SHC1P29353 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
SHC1P29353 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SHC1P29353 AL451142.2-201ENST00000429076 2090 ntBASIC3.85□□□□□ -1.79
SHC1P29353 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SHC1P29353 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.85□□□□□ -1.79
SHC1P29353 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SHC1P29353 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SHC1P29353 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SHC1P29353 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SHC1P29353 RNA5SP366-201ENST00000365454 123 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms