Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.99□□□□□ -1.77
PTPN6P29350 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PTPN6P29350 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PTPN6P29350 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PTPN6P29350 SEC63P2-201ENST00000503863 1939 ntBASIC3.99□□□□□ -1.77
PTPN6P29350 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PTPN6P29350 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.99□□□□□ -1.77
PTPN6P29350 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PTPN6P29350 AC095050.2-201ENST00000510748 1458 ntBASIC3.98□□□□□ -1.77
PTPN6P29350 AC008725.1-201ENST00000605123 2263 ntBASIC3.98□□□□□ -1.77
PTPN6P29350 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
PTPN6P29350 AC008432.1-201ENST00000615912 1320 ntBASIC3.98□□□□□ -1.77
PTPN6P29350 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PTPN6P29350 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
PTPN6P29350 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PTPN6P29350 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.98□□□□□ -1.77
PTPN6P29350 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
PTPN6P29350 NSRP1P1-201ENST00000444067 1693 ntBASIC3.98□□□□□ -1.77
PTPN6P29350 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PTPN6P29350 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PTPN6P29350 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
PTPN6P29350 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.98□□□□□ -1.77
PTPN6P29350 ENSAP3-201ENST00000312710 333 ntBASIC3.98□□□□□ -1.77
PTPN6P29350 Y_RNA.110-201ENST00000363220 99 ntBASIC3.98□□□□□ -1.77
PTPN6P29350 RNU6-609P-201ENST00000365459 107 ntBASIC3.98□□□□□ -1.77
PTPN6P29350 MIR1179-201ENST00000408703 91 ntBASIC3.98□□□□□ -1.77
PTPN6P29350 AC092745.2-202ENST00000411880 369 ntBASIC3.98□□□□□ -1.77
PTPN6P29350 AC011933.1-201ENST00000413334 321 ntBASIC3.98□□□□□ -1.77
PTPN6P29350 AC008173.1-201ENST00000418901 264 ntBASIC3.98□□□□□ -1.77
PTPN6P29350 AL606495.1-201ENST00000422100 813 ntBASIC3.98□□□□□ -1.77
PTPN6P29350 AC073310.1-201ENST00000423226 1033 ntBASIC3.98□□□□□ -1.77
PTPN6P29350 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.98□□□□□ -1.77
PTPN6P29350 RPS3AP54-201ENST00000435535 734 ntBASIC3.98□□□□□ -1.77
PTPN6P29350 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.98□□□□□ -1.77
PTPN6P29350 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.98□□□□□ -1.77
PTPN6P29350 AL512326.1-201ENST00000443050 721 ntBASIC3.98□□□□□ -1.77
PTPN6P29350 HMGB3P22-202ENST00000451823 572 ntBASIC3.98□□□□□ -1.77
PTPN6P29350 AC009963.2-201ENST00000453431 138 ntBASIC3.98□□□□□ -1.77
PTPN6P29350 AL121877.1-201ENST00000453704 622 ntBASIC3.98□□□□□ -1.77
PTPN6P29350 HMGB3P30-201ENST00000457863 606 ntBASIC3.98□□□□□ -1.77
PTPN6P29350 AC116533.1-201ENST00000459748 321 ntBASIC3.98□□□□□ -1.77
PTPN6P29350 AL672167.3-201ENST00000465951 960 ntBASIC3.98□□□□□ -1.77
PTPN6P29350 AC109327.1-201ENST00000471666 403 ntBASIC3.98□□□□□ -1.77
PTPN6P29350 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.98□□□□□ -1.77
PTPN6P29350 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.98□□□□□ -1.77
PTPN6P29350 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.98□□□□□ -1.77
PTPN6P29350 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.98□□□□□ -1.77
PTPN6P29350 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.98□□□□□ -1.77
PTPN6P29350 FTH1P9-201ENST00000513251 355 ntBASIC3.98□□□□□ -1.77
PTPN6P29350 RN7SKP122-201ENST00000515923 296 ntBASIC3.98□□□□□ -1.77
PTPN6P29350 Vault.1-201ENST00000516474 102 ntBASIC3.98□□□□□ -1.77
PTPN6P29350 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.98□□□□□ -1.77
PTPN6P29350 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.98□□□□□ -1.77
PTPN6P29350 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.98□□□□□ -1.77
PTPN6P29350 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.98□□□□□ -1.77
PTPN6P29350 AL136520.1-202ENST00000555494 763 ntBASIC3.98□□□□□ -1.77
PTPN6P29350 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.98□□□□□ -1.77
PTPN6P29350 AC106734.1-201ENST00000568646 663 ntBASIC3.98□□□□□ -1.77
PTPN6P29350 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.98□□□□□ -1.77
PTPN6P29350 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.98□□□□□ -1.77
PTPN6P29350 AC090312.2-201ENST00000582687 378 ntBASIC3.98□□□□□ -1.77
PTPN6P29350 KPNA2P3-201ENST00000584190 848 ntBASIC3.98□□□□□ -1.77
PTPN6P29350 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.98□□□□□ -1.77
PTPN6P29350 AC078899.5-201ENST00000612475 178 ntBASIC3.98□□□□□ -1.77
PTPN6P29350 AC114781.5-201ENST00000615297 108 ntBASIC3.98□□□□□ -1.77
PTPN6P29350 MLECP1-201ENST00000615893 709 ntBASIC3.98□□□□□ -1.77
PTPN6P29350 MIR4727-201ENST00000622232 55 ntBASIC3.98□□□□□ -1.77
PTPN6P29350 AL356121.2-201ENST00000624715 780 ntBASIC3.98□□□□□ -1.77
PTPN6P29350 AC097372.4-201ENST00000625025 466 ntBASIC3.98□□□□□ -1.77
PTPN6P29350 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
PTPN6P29350 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PTPN6P29350 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.98□□□□□ -1.77
PTPN6P29350 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
PTPN6P29350 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.98□□□□□ -1.77
PTPN6P29350 AC119744.1-201ENST00000454746 1715 ntBASIC3.98□□□□□ -1.77
PTPN6P29350 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PTPN6P29350 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
PTPN6P29350 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.97□□□□□ -1.77
PTPN6P29350 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.97□□□□□ -1.77
PTPN6P29350 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.97□□□□□ -1.77
PTPN6P29350 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.97□□□□□ -1.77
PTPN6P29350 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.97□□□□□ -1.77
PTPN6P29350 GCNT6-201ENST00000379591 934 ntBASIC3.97□□□□□ -1.77
PTPN6P29350 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
PTPN6P29350 MIR3074-201ENST00000384885 81 ntBASIC3.97□□□□□ -1.77
PTPN6P29350 DNAJC19P6-201ENST00000401853 280 ntBASIC3.97□□□□□ -1.77
PTPN6P29350 AC019070.1-201ENST00000415008 1024 ntBASIC3.97□□□□□ -1.77
PTPN6P29350 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.97□□□□□ -1.77
PTPN6P29350 VDAC1P6-201ENST00000430062 855 ntBASIC3.97□□□□□ -1.77
PTPN6P29350 MTCO1P43-201ENST00000431831 488 ntBASIC3.97□□□□□ -1.77
PTPN6P29350 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.97□□□□□ -1.77
PTPN6P29350 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.97□□□□□ -1.77
PTPN6P29350 AC017099.1-201ENST00000448261 1028 ntBASIC3.97□□□□□ -1.77
PTPN6P29350 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PTPN6P29350 CYCSP53-201ENST00000455540 265 ntBASIC3.97□□□□□ -1.77
PTPN6P29350 RN7SL691P-201ENST00000494487 301 ntBASIC3.97□□□□□ -1.77
PTPN6P29350 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.97□□□□□ -1.77
PTPN6P29350 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.97□□□□□ -1.77
PTPN6P29350 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.97□□□□□ -1.77
PTPN6P29350 AC112518.2-201ENST00000508565 425 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms