Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
RFX1P22670 RNY1P12-201ENST00000364251 105 ntBASIC6.73□□□□□ -1.33
RFX1P22670 RNU1-59P-201ENST00000364829 162 ntBASIC6.73□□□□□ -1.33
RFX1P22670 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC6.73□□□□□ -1.33
RFX1P22670 AL139805.1-201ENST00000407837 289 ntBASIC6.73□□□□□ -1.33
RFX1P22670 RPS20P15-201ENST00000412792 311 ntBASIC6.73□□□□□ -1.33
RFX1P22670 RSU1P3-201ENST00000412878 835 ntBASIC6.73□□□□□ -1.33
RFX1P22670 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.73□□□□□ -1.33
RFX1P22670 RPL36AP36-201ENST00000418616 301 ntBASIC6.73□□□□□ -1.33
RFX1P22670 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC6.73□□□□□ -1.33
RFX1P22670 BRWD1P3-201ENST00000428816 390 ntBASIC6.73□□□□□ -1.33
RFX1P22670 OR2B7P-201ENST00000429302 934 ntBASIC6.73□□□□□ -1.33
RFX1P22670 RPSAP65-201ENST00000429660 595 ntBASIC6.73□□□□□ -1.33
RFX1P22670 AC119618.1-201ENST00000434191 222 ntBASIC6.73□□□□□ -1.33
RFX1P22670 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC6.73□□□□□ -1.33
RFX1P22670 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.73□□□□□ -1.33
RFX1P22670 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.73□□□□□ -1.33
RFX1P22670 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.73□□□□□ -1.33
RFX1P22670 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC6.73□□□□□ -1.33
RFX1P22670 AC104164.1-201ENST00000460282 590 ntBASIC6.73□□□□□ -1.33
RFX1P22670 PLGLA-201ENST00000465668 449 ntBASIC6.73□□□□□ -1.33
RFX1P22670 AL136126.1-201ENST00000473603 402 ntBASIC6.73□□□□□ -1.33
RFX1P22670 OR4D12P-201ENST00000509361 911 ntBASIC6.73□□□□□ -1.33
RFX1P22670 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC6.73□□□□□ -1.33
RFX1P22670 AC093853.1-201ENST00000515689 483 ntBASIC6.73□□□□□ -1.33
RFX1P22670 TRIM77BP-201ENST00000524985 1119 ntBASIC6.73□□□□□ -1.33
RFX1P22670 PHBP17-201ENST00000528576 541 ntBASIC6.73□□□□□ -1.33
RFX1P22670 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC6.73□□□□□ -1.33
RFX1P22670 PDCD5P1-201ENST00000543528 309 ntBASIC6.73□□□□□ -1.33
RFX1P22670 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC6.73□□□□□ -1.33
RFX1P22670 AC007424.1-203ENST00000554613 687 ntBASIC6.73□□□□□ -1.33
RFX1P22670 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC6.73□□□□□ -1.33
RFX1P22670 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.73□□□□□ -1.33
RFX1P22670 RPS3AP23-202ENST00000574601 686 ntBASIC6.73□□□□□ -1.33
RFX1P22670 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.73□□□□□ -1.33
RFX1P22670 RMST_3.1-201ENST00000611651 109 ntBASIC6.73□□□□□ -1.33
RFX1P22670 U1.25-201ENST00000614085 162 ntBASIC6.73□□□□□ -1.33
RFX1P22670 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.73□□□□□ -1.33
RFX1P22670 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RFX1P22670 AP001541.1-201ENST00000623322 1904 ntBASIC6.73□□□□□ -1.33
RFX1P22670 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
RFX1P22670 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RFX1P22670 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RFX1P22670 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RFX1P22670 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RFX1P22670 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RFX1P22670 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RFX1P22670 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.72□□□□□ -1.33
RFX1P22670 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
RFX1P22670 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RFX1P22670 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.72□□□□□ -1.33
RFX1P22670 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RFX1P22670 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RFX1P22670 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.72□□□□□ -1.33
RFX1P22670 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RFX1P22670 AC005332.5-201ENST00000591222 2919 ntBASIC6.72□□□□□ -1.33
RFX1P22670 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RFX1P22670 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
RFX1P22670 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
RFX1P22670 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RFX1P22670 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.72□□□□□ -1.33
RFX1P22670 RNA5SP258-201ENST00000362750 119 ntBASIC6.72□□□□□ -1.33
RFX1P22670 AL451142.1-201ENST00000375867 775 ntBASIC6.72□□□□□ -1.33
RFX1P22670 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
RFX1P22670 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RFX1P22670 AL121835.1-201ENST00000404250 354 ntBASIC6.72□□□□□ -1.33
RFX1P22670 RNU2-21P-201ENST00000410368 188 ntBASIC6.72□□□□□ -1.33
RFX1P22670 RN7SKP121-201ENST00000410842 305 ntBASIC6.72□□□□□ -1.33
RFX1P22670 RN7SKP144-201ENST00000411108 279 ntBASIC6.72□□□□□ -1.33
RFX1P22670 RNU6-373P-201ENST00000411247 98 ntBASIC6.72□□□□□ -1.33
RFX1P22670 UQCRBP1-201ENST00000421129 336 ntBASIC6.72□□□□□ -1.33
RFX1P22670 RIMKLBP2-201ENST00000424737 654 ntBASIC6.72□□□□□ -1.33
RFX1P22670 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC6.72□□□□□ -1.33
RFX1P22670 HLA-DPA3-207ENST00000454398 229 ntBASIC6.72□□□□□ -1.33
RFX1P22670 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC6.72□□□□□ -1.33
RFX1P22670 RPL12P30-201ENST00000488389 499 ntBASIC6.72□□□□□ -1.33
RFX1P22670 ACTR3BP4-201ENST00000503033 1244 ntBASIC6.72□□□□□ -1.33
RFX1P22670 AC008629.2-201ENST00000503783 483 ntBASIC6.72□□□□□ -1.33
RFX1P22670 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.72□□□□□ -1.33
RFX1P22670 AC010486.1-201ENST00000511793 424 ntBASIC6.72□□□□□ -1.33
RFX1P22670 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC6.72□□□□□ -1.33
RFX1P22670 AC022616.3-201ENST00000523940 148 ntBASIC6.72□□□□□ -1.33
RFX1P22670 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC6.72□□□□□ -1.33
RFX1P22670 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
RFX1P22670 AC009117.1-201ENST00000563948 554 ntBASIC6.72□□□□□ -1.33
RFX1P22670 AC034105.3-201ENST00000565294 442 ntBASIC6.72□□□□□ -1.33
RFX1P22670 HMGB1P6-201ENST00000569046 646 ntBASIC6.72□□□□□ -1.33
RFX1P22670 RN7SL802P-201ENST00000577858 299 ntBASIC6.72□□□□□ -1.33
RFX1P22670 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC6.72□□□□□ -1.33
RFX1P22670 AC015917.1-201ENST00000579654 510 ntBASIC6.72□□□□□ -1.33
RFX1P22670 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.72□□□□□ -1.33
RFX1P22670 AC110743.1-201ENST00000584870 478 ntBASIC6.72□□□□□ -1.33
RFX1P22670 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.72□□□□□ -1.33
RFX1P22670 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC6.72□□□□□ -1.33
RFX1P22670 AC025449.1-201ENST00000603896 529 ntBASIC6.72□□□□□ -1.33
RFX1P22670 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC6.72□□□□□ -1.33
RFX1P22670 MIR6826-201ENST00000617808 98 ntBASIC6.72□□□□□ -1.33
RFX1P22670 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.72□□□□□ -1.33
RFX1P22670 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
RFX1P22670 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms