Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.29□□□□□ -1.72
KRT3P12035 AC112503.2-201ENST00000609005 552 ntBASIC4.29□□□□□ -1.72
KRT3P12035 MLECP1-201ENST00000615893 709 ntBASIC4.29□□□□□ -1.72
KRT3P12035 MIR7151-201ENST00000617477 60 ntBASIC4.29□□□□□ -1.72
KRT3P12035 AP000943.4-201ENST00000622912 357 ntBASIC4.29□□□□□ -1.72
KRT3P12035 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.29□□□□□ -1.72
KRT3P12035 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.29□□□□□ -1.72
KRT3P12035 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
KRT3P12035 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.29□□□□□ -1.72
KRT3P12035 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
KRT3P12035 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KRT3P12035 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
KRT3P12035 MTND4P31-201ENST00000425607 1343 ntBASIC4.28□□□□□ -1.72
KRT3P12035 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.28□□□□□ -1.72
KRT3P12035 RN7SKP44-201ENST00000363602 316 ntBASIC4.28□□□□□ -1.72
KRT3P12035 AP002784.2-201ENST00000397300 549 ntBASIC4.28□□□□□ -1.72
KRT3P12035 RN7SKP33-201ENST00000410942 340 ntBASIC4.28□□□□□ -1.72
KRT3P12035 AC108032.1-201ENST00000416706 207 ntBASIC4.28□□□□□ -1.72
KRT3P12035 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.28□□□□□ -1.72
KRT3P12035 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.28□□□□□ -1.72
KRT3P12035 VDAC1P6-201ENST00000430062 855 ntBASIC4.28□□□□□ -1.72
KRT3P12035 ETF1P3-201ENST00000430422 1160 ntBASIC4.28□□□□□ -1.72
KRT3P12035 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.28□□□□□ -1.72
KRT3P12035 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.28□□□□□ -1.72
KRT3P12035 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.28□□□□□ -1.72
KRT3P12035 RPL38P1-201ENST00000460914 211 ntBASIC4.28□□□□□ -1.72
KRT3P12035 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.28□□□□□ -1.72
KRT3P12035 RN7SL271P-201ENST00000487601 295 ntBASIC4.28□□□□□ -1.72
KRT3P12035 TPT1P3-201ENST00000492841 512 ntBASIC4.28□□□□□ -1.72
KRT3P12035 HNRNPKP5-201ENST00000515300 253 ntBASIC4.28□□□□□ -1.72
KRT3P12035 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.28□□□□□ -1.72
KRT3P12035 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.28□□□□□ -1.72
KRT3P12035 AP000916.1-201ENST00000533869 835 ntBASIC4.28□□□□□ -1.72
KRT3P12035 AC068339.2-201ENST00000534395 618 ntBASIC4.28□□□□□ -1.72
KRT3P12035 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.28□□□□□ -1.72
KRT3P12035 AC135001.1-201ENST00000544546 283 ntBASIC4.28□□□□□ -1.72
KRT3P12035 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.28□□□□□ -1.72
KRT3P12035 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.28□□□□□ -1.72
KRT3P12035 RN7SL600P-201ENST00000581811 299 ntBASIC4.28□□□□□ -1.72
KRT3P12035 MIR3939-201ENST00000582614 106 ntBASIC4.28□□□□□ -1.72
KRT3P12035 AC115085.1-201ENST00000588924 229 ntBASIC4.28□□□□□ -1.72
KRT3P12035 AC011374.2-201ENST00000607135 526 ntBASIC4.28□□□□□ -1.72
KRT3P12035 AL355816.1-201ENST00000607951 118 ntBASIC4.28□□□□□ -1.72
KRT3P12035 AC005962.2-201ENST00000611427 652 ntBASIC4.28□□□□□ -1.72
KRT3P12035 VN1R9P-201ENST00000614184 867 ntBASIC4.28□□□□□ -1.72
KRT3P12035 AC004825.2-201ENST00000616634 455 ntBASIC4.28□□□□□ -1.72
KRT3P12035 AC078880.5-201ENST00000617845 421 ntBASIC4.28□□□□□ -1.72
KRT3P12035 AC103858.2-201ENST00000621471 543 ntBASIC4.28□□□□□ -1.72
KRT3P12035 AP003072.4-201ENST00000624580 310 ntBASIC4.28□□□□□ -1.72
KRT3P12035 AC010608.2-201ENST00000624830 470 ntBASIC4.28□□□□□ -1.72
KRT3P12035 ATE1-AS1-202ENST00000636460 506 ntBASIC4.28□□□□□ -1.72
KRT3P12035 U6.107-201ENST00000637108 79 ntBASIC4.28□□□□□ -1.72
KRT3P12035 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
KRT3P12035 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KRT3P12035 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.28□□□□□ -1.72
KRT3P12035 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
KRT3P12035 IQCB2P-201ENST00000401788 1633 ntBASIC4.28□□□□□ -1.72
KRT3P12035 LINC02471-203ENST00000641941 4752 ntBASIC4.27□□□□□ -1.73
KRT3P12035 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.27□□□□□ -1.73
KRT3P12035 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.27□□□□□ -1.73
KRT3P12035 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
KRT3P12035 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KRT3P12035 AC007529.1-201ENST00000418574 2178 ntBASIC4.27□□□□□ -1.73
KRT3P12035 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
KRT3P12035 FAM3C2-201ENST00000312214 681 ntBASIC4.27□□□□□ -1.73
KRT3P12035 OR11H4-201ENST00000315409 1082 ntBASIC4.27□□□□□ -1.73
KRT3P12035 AC126755.2-208ENST00000327792 462 ntBASIC4.27□□□□□ -1.73
KRT3P12035 AC138969.1-213ENST00000331436 462 ntBASIC4.27□□□□□ -1.73
KRT3P12035 SNORD56.4-201ENST00000363883 71 ntBASIC4.27□□□□□ -1.73
KRT3P12035 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
KRT3P12035 RNU11-4P-201ENST00000391149 133 ntBASIC4.27□□□□□ -1.73
KRT3P12035 SNORA11B-201ENST00000408175 129 ntBASIC4.27□□□□□ -1.73
KRT3P12035 SNORA3C-201ENST00000408792 125 ntBASIC4.27□□□□□ -1.73
KRT3P12035 RNA5SP39-201ENST00000411245 120 ntBASIC4.27□□□□□ -1.73
KRT3P12035 AC234782.4-201ENST00000417646 1048 ntBASIC4.27□□□□□ -1.73
KRT3P12035 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.27□□□□□ -1.73
KRT3P12035 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.27□□□□□ -1.73
KRT3P12035 DEFB130D-201ENST00000426866 237 ntBASIC4.27□□□□□ -1.73
KRT3P12035 AC093422.3-201ENST00000428506 305 ntBASIC4.27□□□□□ -1.73
KRT3P12035 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.27□□□□□ -1.73
KRT3P12035 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
KRT3P12035 AL158053.1-201ENST00000441503 453 ntBASIC4.27□□□□□ -1.73
KRT3P12035 RPS4XP4-201ENST00000443195 763 ntBASIC4.27□□□□□ -1.73
KRT3P12035 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.27□□□□□ -1.73
KRT3P12035 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.27□□□□□ -1.73
KRT3P12035 TPMTP4-201ENST00000450749 678 ntBASIC4.27□□□□□ -1.73
KRT3P12035 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
KRT3P12035 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.27□□□□□ -1.73
KRT3P12035 AC008379.1-201ENST00000463655 464 ntBASIC4.27□□□□□ -1.73
KRT3P12035 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.27□□□□□ -1.73
KRT3P12035 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.27□□□□□ -1.73
KRT3P12035 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.27□□□□□ -1.73
KRT3P12035 MTND3P3-201ENST00000505004 126 ntBASIC4.27□□□□□ -1.73
KRT3P12035 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
KRT3P12035 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.27□□□□□ -1.73
KRT3P12035 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.27□□□□□ -1.73
KRT3P12035 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.27□□□□□ -1.73
KRT3P12035 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.27□□□□□ -1.73
KRT3P12035 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
KRT3P12035 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms