Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 VDAC1P2-201ENST00000423609 850 ntBASIC8.86□□□□□ -0.99
CHGAP10645 AC092967.1-201ENST00000449016 481 ntBASIC8.86□□□□□ -0.99
CHGAP10645 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC8.86□□□□□ -0.99
CHGAP10645 AC092865.4-201ENST00000477936 615 ntBASIC8.86□□□□□ -0.99
CHGAP10645 RPL23AP72-201ENST00000492447 435 ntBASIC8.86□□□□□ -0.99
CHGAP10645 RN7SKP96-201ENST00000516948 297 ntBASIC8.86□□□□□ -0.99
CHGAP10645 IGKV2-19-201ENST00000518132 283 ntBASIC8.86□□□□□ -0.99
CHGAP10645 AP000907.2-201ENST00000530827 353 ntBASIC8.86□□□□□ -0.99
CHGAP10645 HMGB1P42-201ENST00000532126 553 ntBASIC8.86□□□□□ -0.99
CHGAP10645 PCNAP4-201ENST00000532690 730 ntBASIC8.86□□□□□ -0.99
CHGAP10645 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHGAP10645 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHGAP10645 AC090425.1-201ENST00000610007 140 ntBASIC8.86□□□□□ -0.99
CHGAP10645 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC8.86□□□□□ -0.99
CHGAP10645 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC8.86□□□□□ -0.99
CHGAP10645 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHGAP10645 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHGAP10645 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
CHGAP10645 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHGAP10645 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHGAP10645 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC8.86□□□□□ -0.99
CHGAP10645 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC8.85□□□□□ -0.99
CHGAP10645 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHGAP10645 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CHGAP10645 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHGAP10645 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC8.85□□□□□ -0.99
CHGAP10645 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC8.85□□□□□ -0.99
CHGAP10645 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CHGAP10645 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHGAP10645 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
CHGAP10645 AC012618.3-205ENST00000637896 1496 ntBASIC8.85□□□□□ -0.99
CHGAP10645 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CHGAP10645 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
CHGAP10645 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC8.85□□□□□ -0.99
CHGAP10645 Y_RNA.301-201ENST00000364990 103 ntBASIC8.85□□□□□ -0.99
CHGAP10645 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHGAP10645 RNU6-1013P-201ENST00000384180 107 ntBASIC8.85□□□□□ -0.99
CHGAP10645 MIR649-201ENST00000384843 97 ntBASIC8.85□□□□□ -0.99
CHGAP10645 AL592114.1-201ENST00000403842 483 ntBASIC8.85□□□□□ -0.99
CHGAP10645 MIR1178-201ENST00000408396 91 ntBASIC8.85□□□□□ -0.99
CHGAP10645 AC009310.1-201ENST00000414414 451 ntBASIC8.85□□□□□ -0.99
CHGAP10645 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC8.85□□□□□ -0.99
CHGAP10645 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC8.85□□□□□ -0.99
CHGAP10645 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC8.85□□□□□ -0.99
CHGAP10645 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC8.85□□□□□ -0.99
CHGAP10645 SNRPEP4-201ENST00000435815 279 ntBASIC8.85□□□□□ -0.99
CHGAP10645 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC8.85□□□□□ -0.99
CHGAP10645 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC8.85□□□□□ -0.99
CHGAP10645 RAD51AP1P1-201ENST00000484195 1001 ntBASIC8.85□□□□□ -0.99
CHGAP10645 AK3P4-201ENST00000504283 583 ntBASIC8.85□□□□□ -0.99
CHGAP10645 ATP5LP3-201ENST00000514223 304 ntBASIC8.85□□□□□ -0.99
CHGAP10645 Y_RNA.665-201ENST00000516177 98 ntBASIC8.85□□□□□ -0.99
CHGAP10645 SNORD27.1-201ENST00000516319 72 ntBASIC8.85□□□□□ -0.99
CHGAP10645 AC022634.1-201ENST00000520765 532 ntBASIC8.85□□□□□ -0.99
CHGAP10645 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC8.85□□□□□ -0.99
CHGAP10645 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC8.85□□□□□ -0.99
CHGAP10645 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC8.85□□□□□ -0.99
CHGAP10645 SNRPGP18-201ENST00000553000 214 ntBASIC8.85□□□□□ -0.99
CHGAP10645 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC8.85□□□□□ -0.99
CHGAP10645 MIR3146-201ENST00000580367 79 ntBASIC8.85□□□□□ -0.99
CHGAP10645 MIR4503-201ENST00000582187 83 ntBASIC8.85□□□□□ -0.99
CHGAP10645 AC027229.1-201ENST00000583887 253 ntBASIC8.85□□□□□ -0.99
CHGAP10645 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC8.85□□□□□ -0.99
CHGAP10645 COX6CP7-201ENST00000597056 208 ntBASIC8.85□□□□□ -0.99
CHGAP10645 APOOP1-201ENST00000604695 592 ntBASIC8.85□□□□□ -0.99
CHGAP10645 MIR8089-201ENST00000620165 82 ntBASIC8.85□□□□□ -0.99
CHGAP10645 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC8.85□□□□□ -0.99
CHGAP10645 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CHGAP10645 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHGAP10645 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC8.85□□□□□ -0.99
CHGAP10645 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHGAP10645 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CHGAP10645 MTND4P14-201ENST00000435799 1354 ntBASIC8.85□□□□□ -0.99
CHGAP10645 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHGAP10645 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
CHGAP10645 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
CHGAP10645 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC8.84□□□□□ -0.99
CHGAP10645 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC8.84□□□□□ -0.99
CHGAP10645 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC8.84□□□□□ -0.99
CHGAP10645 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CHGAP10645 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
CHGAP10645 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CHGAP10645 MTND5P33-201ENST00000571250 1450 ntBASIC8.84□□□□□ -0.99
CHGAP10645 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
CHGAP10645 AL662795.2-201ENST00000624252 3706 ntBASIC8.84□□□□□ -0.99
CHGAP10645 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CHGAP10645 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
CHGAP10645 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
CHGAP10645 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CHGAP10645 AL356421.1-201ENST00000403255 413 ntBASIC8.84□□□□□ -0.99
CHGAP10645 SNRPEP6-201ENST00000407465 277 ntBASIC8.84□□□□□ -0.99
CHGAP10645 Y_RNA.605-201ENST00000410577 105 ntBASIC8.84□□□□□ -0.99
CHGAP10645 NUP35P1-201ENST00000422734 947 ntBASIC8.84□□□□□ -0.99
CHGAP10645 AC245884.2-201ENST00000426257 404 ntBASIC8.84□□□□□ -0.99
CHGAP10645 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC8.84□□□□□ -0.99
CHGAP10645 RPS20P5-201ENST00000434808 360 ntBASIC8.84□□□□□ -0.99
CHGAP10645 RPS3AP52-201ENST00000435639 297 ntBASIC8.84□□□□□ -0.99
CHGAP10645 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC8.84□□□□□ -0.99
CHGAP10645 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC8.84□□□□□ -0.99
CHGAP10645 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC8.84□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 151.9 ms