Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 AC006427.1-201ENST00000514359 712 ntBASIC6.34□□□□□ -1.39
GRIN3BO60391 AC239860.2-201ENST00000525886 270 ntBASIC6.34□□□□□ -1.39
GRIN3BO60391 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
GRIN3BO60391 SERPINE4P-201ENST00000554978 281 ntBASIC6.34□□□□□ -1.39
GRIN3BO60391 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC6.34□□□□□ -1.39
GRIN3BO60391 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC6.34□□□□□ -1.39
GRIN3BO60391 AP001004.1-201ENST00000582468 324 ntBASIC6.34□□□□□ -1.39
GRIN3BO60391 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC6.34□□□□□ -1.39
GRIN3BO60391 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC6.34□□□□□ -1.39
GRIN3BO60391 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC6.34□□□□□ -1.39
GRIN3BO60391 AC090517.2-201ENST00000614966 680 ntBASIC6.34□□□□□ -1.39
GRIN3BO60391 AL356321.1-201ENST00000621360 228 ntBASIC6.34□□□□□ -1.39
GRIN3BO60391 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
GRIN3BO60391 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
GRIN3BO60391 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
GRIN3BO60391 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
GRIN3BO60391 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.34□□□□□ -1.39
GRIN3BO60391 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC6.34□□□□□ -1.39
GRIN3BO60391 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
GRIN3BO60391 CASC19-284ENST00000642142 1868 ntBASIC6.34□□□□□ -1.39
GRIN3BO60391 AL353796.1-201ENST00000561542 3241 ntBASIC6.34□□□□□ -1.39
GRIN3BO60391 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
GRIN3BO60391 LINC00561-201ENST00000565815 2738 ntBASIC6.34□□□□□ -1.4
GRIN3BO60391 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
GRIN3BO60391 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.33□□□□□ -1.4
GRIN3BO60391 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
GRIN3BO60391 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
GRIN3BO60391 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
GRIN3BO60391 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
GRIN3BO60391 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
GRIN3BO60391 RNA5SP90-201ENST00000364801 99 ntBASIC6.33□□□□□ -1.4
GRIN3BO60391 SNORA70F-201ENST00000384142 135 ntBASIC6.33□□□□□ -1.4
GRIN3BO60391 SNORA51.12-201ENST00000384448 134 ntBASIC6.33□□□□□ -1.4
GRIN3BO60391 Y_RNA.582-201ENST00000391023 95 ntBASIC6.33□□□□□ -1.4
GRIN3BO60391 snosnR66.1-201ENST00000391095 99 ntBASIC6.33□□□□□ -1.4
GRIN3BO60391 AL590290.1-201ENST00000405336 380 ntBASIC6.33□□□□□ -1.4
GRIN3BO60391 AL139098.1-201ENST00000407291 389 ntBASIC6.33□□□□□ -1.4
GRIN3BO60391 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC6.33□□□□□ -1.4
GRIN3BO60391 RPL36AP36-201ENST00000418616 301 ntBASIC6.33□□□□□ -1.4
GRIN3BO60391 AL358176.3-201ENST00000420757 454 ntBASIC6.33□□□□□ -1.4
GRIN3BO60391 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC6.33□□□□□ -1.4
GRIN3BO60391 AC093698.1-201ENST00000423843 571 ntBASIC6.33□□□□□ -1.4
GRIN3BO60391 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC6.33□□□□□ -1.4
GRIN3BO60391 RIMKLBP2-201ENST00000424737 654 ntBASIC6.33□□□□□ -1.4
GRIN3BO60391 GAS5-208ENST00000425771 242 ntTSL 3 BASIC6.33□□□□□ -1.4
GRIN3BO60391 USP9YP18-201ENST00000425912 695 ntBASIC6.33□□□□□ -1.4
GRIN3BO60391 MTCO2P19-201ENST00000427513 598 ntBASIC6.33□□□□□ -1.4
GRIN3BO60391 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC6.33□□□□□ -1.4
GRIN3BO60391 AC073410.1-201ENST00000435125 589 ntBASIC6.33□□□□□ -1.4
GRIN3BO60391 TXNP5-201ENST00000441043 315 ntBASIC6.33□□□□□ -1.4
GRIN3BO60391 VN1R10P-201ENST00000447106 875 ntBASIC6.33□□□□□ -1.4
GRIN3BO60391 VN1R34P-201ENST00000447387 883 ntBASIC6.33□□□□□ -1.4
GRIN3BO60391 AC108463.1-201ENST00000450258 347 ntBASIC6.33□□□□□ -1.4
GRIN3BO60391 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC6.33□□□□□ -1.4
GRIN3BO60391 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC6.33□□□□□ -1.4
GRIN3BO60391 AC015724.1-201ENST00000478577 156 ntBASIC6.33□□□□□ -1.4
GRIN3BO60391 PRDX4P1-201ENST00000507189 574 ntBASIC6.33□□□□□ -1.4
GRIN3BO60391 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC6.33□□□□□ -1.4
GRIN3BO60391 AC109471.1-201ENST00000511631 612 ntBASIC6.33□□□□□ -1.4
GRIN3BO60391 SAP18P1-201ENST00000512058 390 ntBASIC6.33□□□□□ -1.4
GRIN3BO60391 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC6.33□□□□□ -1.4
GRIN3BO60391 snoU109.5-201ENST00000516231 132 ntBASIC6.33□□□□□ -1.4
GRIN3BO60391 RNU6-885P-201ENST00000516607 104 ntBASIC6.33□□□□□ -1.4
GRIN3BO60391 RNU6-528P-201ENST00000516926 100 ntBASIC6.33□□□□□ -1.4
GRIN3BO60391 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC6.33□□□□□ -1.4
GRIN3BO60391 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC6.33□□□□□ -1.4
GRIN3BO60391 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC6.33□□□□□ -1.4
GRIN3BO60391 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
GRIN3BO60391 AC138915.2-201ENST00000569776 97 ntBASIC6.33□□□□□ -1.4
GRIN3BO60391 AC012417.1-201ENST00000582307 1039 ntBASIC6.33□□□□□ -1.4
GRIN3BO60391 AL596327.1-201ENST00000603629 213 ntBASIC6.33□□□□□ -1.4
GRIN3BO60391 AC105254.2-201ENST00000603636 436 ntBASIC6.33□□□□□ -1.4
GRIN3BO60391 AC006566.1-201ENST00000608943 513 ntBASIC6.33□□□□□ -1.4
GRIN3BO60391 AC009120.7-201ENST00000623452 780 ntBASIC6.33□□□□□ -1.4
GRIN3BO60391 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
GRIN3BO60391 RMST-202ENST00000541282 2099 ntTSL 2 BASIC6.33□□□□□ -1.4
GRIN3BO60391 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
GRIN3BO60391 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
GRIN3BO60391 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
GRIN3BO60391 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
GRIN3BO60391 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.33□□□□□ -1.4
GRIN3BO60391 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.33□□□□□ -1.4
GRIN3BO60391 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
GRIN3BO60391 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
GRIN3BO60391 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
GRIN3BO60391 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
GRIN3BO60391 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
GRIN3BO60391 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
GRIN3BO60391 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
GRIN3BO60391 MTND5P26-201ENST00000426018 1752 ntBASIC6.32□□□□□ -1.4
GRIN3BO60391 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
GRIN3BO60391 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
GRIN3BO60391 RNU6-582P-201ENST00000362989 107 ntBASIC6.32□□□□□ -1.4
GRIN3BO60391 SNORD116-23-201ENST00000384645 92 ntBASIC6.32□□□□□ -1.4
GRIN3BO60391 AC007066.1-201ENST00000392902 381 ntBASIC6.32□□□□□ -1.4
GRIN3BO60391 RPL23AP29-201ENST00000397284 453 ntBASIC6.32□□□□□ -1.4
GRIN3BO60391 DBIP1-201ENST00000401435 260 ntBASIC6.32□□□□□ -1.4
GRIN3BO60391 BTF3P7-201ENST00000407097 488 ntBASIC6.32□□□□□ -1.4
GRIN3BO60391 RNA5SP44-201ENST00000410446 133 ntBASIC6.32□□□□□ -1.4
GRIN3BO60391 RN7SKP106-201ENST00000410832 272 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms