Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 MIR378J-201ENST00000611988 109 ntBASIC4.63□□□□□ -1.67
SMAD6O43541 AL121873.1-201ENST00000616013 524 ntBASIC4.63□□□□□ -1.67
SMAD6O43541 AC006927.3-201ENST00000638789 384 ntBASIC4.63□□□□□ -1.67
SMAD6O43541 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.63□□□□□ -1.67
SMAD6O43541 AL672167.1-203ENST00000641299 2975 ntBASIC4.63□□□□□ -1.67
SMAD6O43541 AC108751.5-201ENST00000492880 1336 ntBASIC4.63□□□□□ -1.67
SMAD6O43541 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SMAD6O43541 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
SMAD6O43541 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
SMAD6O43541 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.63□□□□□ -1.67
SMAD6O43541 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SMAD6O43541 OR56B2P-202ENST00000641377 2453 ntBASIC4.63□□□□□ -1.67
SMAD6O43541 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.63□□□□□ -1.67
SMAD6O43541 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.63□□□□□ -1.67
SMAD6O43541 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SMAD6O43541 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SMAD6O43541 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SMAD6O43541 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.62□□□□□ -1.67
SMAD6O43541 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SMAD6O43541 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.62□□□□□ -1.67
SMAD6O43541 IGKV7-3-201ENST00000357453 298 ntBASIC4.62□□□□□ -1.67
SMAD6O43541 RNA5SP447-201ENST00000363749 119 ntBASIC4.62□□□□□ -1.67
SMAD6O43541 Y_RNA.194-201ENST00000363985 102 ntBASIC4.62□□□□□ -1.67
SMAD6O43541 RPL23AP59-201ENST00000399415 461 ntBASIC4.62□□□□□ -1.67
SMAD6O43541 ELOCP19-201ENST00000411919 318 ntBASIC4.62□□□□□ -1.67
SMAD6O43541 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.62□□□□□ -1.67
SMAD6O43541 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.62□□□□□ -1.67
SMAD6O43541 AL356320.2-201ENST00000417263 507 ntBASIC4.62□□□□□ -1.67
SMAD6O43541 AC011233.1-201ENST00000422812 283 ntBASIC4.62□□□□□ -1.67
SMAD6O43541 NANOGP2-201ENST00000435391 727 ntBASIC4.62□□□□□ -1.67
SMAD6O43541 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.62□□□□□ -1.67
SMAD6O43541 HSFY3P-201ENST00000444242 1191 ntBASIC4.62□□□□□ -1.67
SMAD6O43541 RPS27P5-201ENST00000444247 244 ntBASIC4.62□□□□□ -1.67
SMAD6O43541 AL096803.2-201ENST00000450032 677 ntBASIC4.62□□□□□ -1.67
SMAD6O43541 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.62□□□□□ -1.67
SMAD6O43541 MRPL35P4-201ENST00000453682 566 ntBASIC4.62□□□□□ -1.67
SMAD6O43541 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.62□□□□□ -1.67
SMAD6O43541 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.62□□□□□ -1.67
SMAD6O43541 AC112206.1-201ENST00000468416 477 ntBASIC4.62□□□□□ -1.67
SMAD6O43541 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.62□□□□□ -1.67
SMAD6O43541 RN7SL481P-201ENST00000477764 299 ntBASIC4.62□□□□□ -1.67
SMAD6O43541 SUMO1P1-201ENST00000497904 306 ntBASIC4.62□□□□□ -1.67
SMAD6O43541 AC025674.1-201ENST00000507074 324 ntBASIC4.62□□□□□ -1.67
SMAD6O43541 MTCO3P7-201ENST00000510008 774 ntBASIC4.62□□□□□ -1.67
SMAD6O43541 XKRY-201ENST00000510392 1100 ntBASIC4.62□□□□□ -1.67
SMAD6O43541 BTG4P1-201ENST00000510421 183 ntBASIC4.62□□□□□ -1.67
SMAD6O43541 AC093755.1-201ENST00000512950 1023 ntBASIC4.62□□□□□ -1.67
SMAD6O43541 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.62□□□□□ -1.67
SMAD6O43541 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.62□□□□□ -1.67
SMAD6O43541 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.62□□□□□ -1.67
SMAD6O43541 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.62□□□□□ -1.67
SMAD6O43541 AC107304.1-201ENST00000604229 296 ntBASIC4.62□□□□□ -1.67
SMAD6O43541 AC104073.3-201ENST00000610942 955 ntBASIC4.62□□□□□ -1.67
SMAD6O43541 AC024257.5-201ENST00000612739 531 ntBASIC4.62□□□□□ -1.67
SMAD6O43541 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.62□□□□□ -1.67
SMAD6O43541 AL031667.3-201ENST00000620124 655 ntBASIC4.62□□□□□ -1.67
SMAD6O43541 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.62□□□□□ -1.67
SMAD6O43541 OR2L1P-202ENST00000641567 1023 ntBASIC4.62□□□□□ -1.67
SMAD6O43541 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SMAD6O43541 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SMAD6O43541 ZNF542P-204ENST00000482727 1305 ntBASIC4.62□□□□□ -1.67
SMAD6O43541 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SMAD6O43541 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.62□□□□□ -1.67
SMAD6O43541 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SMAD6O43541 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SMAD6O43541 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SMAD6O43541 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.62□□□□□ -1.67
SMAD6O43541 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
SMAD6O43541 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SMAD6O43541 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SMAD6O43541 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
SMAD6O43541 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SMAD6O43541 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.61□□□□□ -1.67
SMAD6O43541 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SMAD6O43541 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SMAD6O43541 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SMAD6O43541 U6.112-201ENST00000384129 70 ntBASIC4.61□□□□□ -1.67
SMAD6O43541 RNU6-83P-201ENST00000384568 112 ntBASIC4.61□□□□□ -1.67
SMAD6O43541 Y_RNA.578-201ENST00000390903 88 ntBASIC4.61□□□□□ -1.67
SMAD6O43541 AL355379.1-201ENST00000405542 640 ntBASIC4.61□□□□□ -1.67
SMAD6O43541 AC092638.1-201ENST00000411966 1275 ntBASIC4.61□□□□□ -1.67
SMAD6O43541 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.61□□□□□ -1.67
SMAD6O43541 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.61□□□□□ -1.67
SMAD6O43541 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.61□□□□□ -1.67
SMAD6O43541 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.61□□□□□ -1.67
SMAD6O43541 RPF2P1-201ENST00000424137 906 ntBASIC4.61□□□□□ -1.67
SMAD6O43541 RPL21P43-201ENST00000425440 472 ntBASIC4.61□□□□□ -1.67
SMAD6O43541 RPS12P10-201ENST00000427031 377 ntBASIC4.61□□□□□ -1.67
SMAD6O43541 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.61□□□□□ -1.67
SMAD6O43541 MTCO3P21-201ENST00000430791 643 ntBASIC4.61□□□□□ -1.67
SMAD6O43541 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.61□□□□□ -1.67
SMAD6O43541 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.61□□□□□ -1.67
SMAD6O43541 MTCO2P16-201ENST00000436962 677 ntBASIC4.61□□□□□ -1.67
SMAD6O43541 ISCA1P2-201ENST00000438679 421 ntBASIC4.61□□□□□ -1.67
SMAD6O43541 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.61□□□□□ -1.67
SMAD6O43541 PTGES3P1-201ENST00000439531 483 ntBASIC4.61□□□□□ -1.67
SMAD6O43541 AC092393.1-201ENST00000439625 742 ntBASIC4.61□□□□□ -1.67
SMAD6O43541 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.61□□□□□ -1.67
SMAD6O43541 MTCO2P18-201ENST00000457151 658 ntBASIC4.61□□□□□ -1.67
SMAD6O43541 RNU6-1218P-201ENST00000458990 108 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms