Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.16□□□□□ -1.42
SOX1O00570 DNAJC19P7-201ENST00000428811 344 ntBASIC6.16□□□□□ -1.42
SOX1O00570 AC018644.1-201ENST00000429934 551 ntBASIC6.16□□□□□ -1.42
SOX1O00570 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SOX1O00570 CBWD4P-201ENST00000445695 655 ntBASIC6.16□□□□□ -1.42
SOX1O00570 MGAT2P1-201ENST00000449718 797 ntBASIC6.16□□□□□ -1.42
SOX1O00570 RPS23P7-201ENST00000466210 444 ntBASIC6.16□□□□□ -1.42
SOX1O00570 AC083798.1-201ENST00000472671 131 ntBASIC6.16□□□□□ -1.42
SOX1O00570 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC6.16□□□□□ -1.42
SOX1O00570 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC6.16□□□□□ -1.42
SOX1O00570 RN7SKP283-201ENST00000517197 270 ntBASIC6.16□□□□□ -1.42
SOX1O00570 AC139365.2-201ENST00000517972 253 ntBASIC6.16□□□□□ -1.42
SOX1O00570 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC6.16□□□□□ -1.42
SOX1O00570 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.16□□□□□ -1.42
SOX1O00570 AC090502.2-201ENST00000549267 280 ntBASIC6.16□□□□□ -1.42
SOX1O00570 SUB1P2-201ENST00000556401 297 ntBASIC6.16□□□□□ -1.42
SOX1O00570 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.16□□□□□ -1.42
SOX1O00570 AC022884.3-201ENST00000579571 248 ntBASIC6.16□□□□□ -1.42
SOX1O00570 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.16□□□□□ -1.42
SOX1O00570 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.16□□□□□ -1.42
SOX1O00570 AC018690.1-201ENST00000608144 626 ntBASIC6.16□□□□□ -1.42
SOX1O00570 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC6.16□□□□□ -1.42
SOX1O00570 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.16□□□□□ -1.42
SOX1O00570 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SOX1O00570 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
SOX1O00570 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SOX1O00570 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
SOX1O00570 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
SOX1O00570 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SOX1O00570 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SOX1O00570 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SOX1O00570 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.16□□□□□ -1.42
SOX1O00570 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SOX1O00570 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
SOX1O00570 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.15□□□□□ -1.42
SOX1O00570 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SOX1O00570 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.15□□□□□ -1.42
SOX1O00570 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.15□□□□□ -1.42
SOX1O00570 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
SOX1O00570 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.15□□□□□ -1.42
SOX1O00570 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.15□□□□□ -1.42
SOX1O00570 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SOX1O00570 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
SOX1O00570 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SOX1O00570 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SOX1O00570 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SOX1O00570 AL512646.1-201ENST00000269395 1077 ntBASIC6.15□□□□□ -1.42
SOX1O00570 Y_RNA.138-201ENST00000363462 102 ntBASIC6.15□□□□□ -1.42
SOX1O00570 RNA5SP505-201ENST00000364748 108 ntBASIC6.15□□□□□ -1.42
SOX1O00570 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SOX1O00570 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
SOX1O00570 RNU1-39P-201ENST00000383897 165 ntBASIC6.15□□□□□ -1.42
SOX1O00570 RNU1-149P-201ENST00000390870 161 ntBASIC6.15□□□□□ -1.42
SOX1O00570 RNA5SP91-201ENST00000390902 119 ntBASIC6.15□□□□□ -1.42
SOX1O00570 FGFR1OP2P1-201ENST00000395943 500 ntBASIC6.15□□□□□ -1.42
SOX1O00570 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SOX1O00570 RNU2-28P-201ENST00000410457 189 ntBASIC6.15□□□□□ -1.42
SOX1O00570 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.15□□□□□ -1.42
SOX1O00570 VN1R36P-201ENST00000414936 291 ntBASIC6.15□□□□□ -1.42
SOX1O00570 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC6.15□□□□□ -1.42
SOX1O00570 RPL35AP12-201ENST00000425362 338 ntBASIC6.15□□□□□ -1.42
SOX1O00570 OR51AB1P-201ENST00000429046 620 ntBASIC6.15□□□□□ -1.42
SOX1O00570 AC004129.2-201ENST00000457229 287 ntBASIC6.15□□□□□ -1.42
SOX1O00570 snoU13.20-201ENST00000459180 104 ntBASIC6.15□□□□□ -1.42
SOX1O00570 RPL7AP28-201ENST00000464513 571 ntBASIC6.15□□□□□ -1.42
SOX1O00570 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC6.15□□□□□ -1.42
SOX1O00570 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.15□□□□□ -1.42
SOX1O00570 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.15□□□□□ -1.42
SOX1O00570 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.15□□□□□ -1.42
SOX1O00570 AC100784.1-201ENST00000522790 310 ntBASIC6.15□□□□□ -1.42
SOX1O00570 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC6.15□□□□□ -1.42
SOX1O00570 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC6.15□□□□□ -1.42
SOX1O00570 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC6.15□□□□□ -1.42
SOX1O00570 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6.15□□□□□ -1.42
SOX1O00570 uc_338.26-201ENST00000612659 160 ntBASIC6.15□□□□□ -1.42
SOX1O00570 DISC2.1-201ENST00000612827 205 ntBASIC6.15□□□□□ -1.42
SOX1O00570 U1.34-201ENST00000618578 162 ntBASIC6.15□□□□□ -1.42
SOX1O00570 AC008121.3-201ENST00000618726 433 ntBASIC6.15□□□□□ -1.42
SOX1O00570 AC087385.3-201ENST00000620477 187 ntBASIC6.15□□□□□ -1.42
SOX1O00570 AC079684.1-201ENST00000621405 437 ntBASIC6.15□□□□□ -1.42
SOX1O00570 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC6.15□□□□□ -1.42
SOX1O00570 MIR1302-1-201ENST00000637932 143 ntBASIC6.15□□□□□ -1.42
SOX1O00570 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.15□□□□□ -1.42
SOX1O00570 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SOX1O00570 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SOX1O00570 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.15□□□□□ -1.43
SOX1O00570 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.15□□□□□ -1.43
SOX1O00570 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
SOX1O00570 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SOX1O00570 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SOX1O00570 MTND4P27-201ENST00000450813 1354 ntBASIC6.15□□□□□ -1.43
SOX1O00570 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.15□□□□□ -1.43
SOX1O00570 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SOX1O00570 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.15□□□□□ -1.43
SOX1O00570 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.15□□□□□ -1.43
SOX1O00570 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
SOX1O00570 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SOX1O00570 AC107021.2-201ENST00000567714 2095 ntBASIC6.14□□□□□ -1.43
SOX1O00570 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SOX1O00570 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms