Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
BIVM-ERCC5R4GMW8 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC5.68□□□□□ -1.5
BIVM-ERCC5R4GMW8 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
BIVM-ERCC5R4GMW8 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
BIVM-ERCC5R4GMW8 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
BIVM-ERCC5R4GMW8 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.67□□□□□ -1.5
BIVM-ERCC5R4GMW8 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.67□□□□□ -1.5
BIVM-ERCC5R4GMW8 RPL7P44-201ENST00000424827 742 ntBASIC5.67□□□□□ -1.5
BIVM-ERCC5R4GMW8 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.67□□□□□ -1.5
BIVM-ERCC5R4GMW8 RPL23AP82-202ENST00000427528 469 ntBASIC5.67□□□□□ -1.5
BIVM-ERCC5R4GMW8 CENPBD1P1-201ENST00000464061 469 ntBASIC5.67□□□□□ -1.5
BIVM-ERCC5R4GMW8 RPL27AP5-201ENST00000469428 449 ntBASIC5.67□□□□□ -1.5
BIVM-ERCC5R4GMW8 RPL7P23-201ENST00000493874 747 ntBASIC5.67□□□□□ -1.5
BIVM-ERCC5R4GMW8 Vault.1-201ENST00000516474 102 ntBASIC5.67□□□□□ -1.5
BIVM-ERCC5R4GMW8 MIMT1-201ENST00000597105 1050 ntBASIC5.67□□□□□ -1.5
BIVM-ERCC5R4GMW8 AC015802.5-201ENST00000607478 399 ntBASIC5.67□□□□□ -1.5
BIVM-ERCC5R4GMW8 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
BIVM-ERCC5R4GMW8 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
BIVM-ERCC5R4GMW8 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.67□□□□□ -1.5
BIVM-ERCC5R4GMW8 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
BIVM-ERCC5R4GMW8 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.67□□□□□ -1.5
BIVM-ERCC5R4GMW8 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
BIVM-ERCC5R4GMW8 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
BIVM-ERCC5R4GMW8 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.66□□□□□ -1.5
BIVM-ERCC5R4GMW8 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC5.66□□□□□ -1.5
BIVM-ERCC5R4GMW8 AC020893.1-201ENST00000502452 580 ntBASIC5.66□□□□□ -1.5
BIVM-ERCC5R4GMW8 AC018442.3-201ENST00000523025 183 ntBASIC5.66□□□□□ -1.5
BIVM-ERCC5R4GMW8 DUXAP6-201ENST00000553858 601 ntBASIC5.66□□□□□ -1.5
BIVM-ERCC5R4GMW8 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.66□□□□□ -1.5
BIVM-ERCC5R4GMW8 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
BIVM-ERCC5R4GMW8 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
BIVM-ERCC5R4GMW8 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.66□□□□□ -1.5
BIVM-ERCC5R4GMW8 HSPA8P19-201ENST00000505359 1517 ntBASIC5.66□□□□□ -1.5
BIVM-ERCC5R4GMW8 RNU6-283P-201ENST00000364788 107 ntBASIC5.66□□□□□ -1.5
BIVM-ERCC5R4GMW8 HSPE1P16-201ENST00000426640 348 ntBASIC5.66□□□□□ -1.5
BIVM-ERCC5R4GMW8 AC074367.1-201ENST00000438685 1125 ntBASIC5.66□□□□□ -1.5
BIVM-ERCC5R4GMW8 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.66□□□□□ -1.5
BIVM-ERCC5R4GMW8 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.66□□□□□ -1.5
BIVM-ERCC5R4GMW8 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC5.66□□□□□ -1.5
BIVM-ERCC5R4GMW8 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
BIVM-ERCC5R4GMW8 AC006484.1-201ENST00000435086 1884 ntBASIC5.66□□□□□ -1.5
BIVM-ERCC5R4GMW8 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
BIVM-ERCC5R4GMW8 U3.26-201ENST00000391236 204 ntBASIC5.65□□□□□ -1.51
BIVM-ERCC5R4GMW8 TAF9BP1-201ENST00000396646 746 ntBASIC5.65□□□□□ -1.51
BIVM-ERCC5R4GMW8 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.51
BIVM-ERCC5R4GMW8 MTND4P22-201ENST00000413116 1169 ntBASIC5.65□□□□□ -1.51
BIVM-ERCC5R4GMW8 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.65□□□□□ -1.51
BIVM-ERCC5R4GMW8 S100A11P2-201ENST00000467589 312 ntBASIC5.65□□□□□ -1.51
BIVM-ERCC5R4GMW8 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC5.65□□□□□ -1.51
BIVM-ERCC5R4GMW8 AL596275.2-204ENST00000641628 552 ntBASIC5.65□□□□□ -1.51
BIVM-ERCC5R4GMW8 AL596275.2-206ENST00000641957 626 ntBASIC5.65□□□□□ -1.51
BIVM-ERCC5R4GMW8 AC125336.1-201ENST00000508893 2827 ntBASIC5.65□□□□□ -1.51
BIVM-ERCC5R4GMW8 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
BIVM-ERCC5R4GMW8 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
BIVM-ERCC5R4GMW8 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.65□□□□□ -1.51
BIVM-ERCC5R4GMW8 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
BIVM-ERCC5R4GMW8 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
BIVM-ERCC5R4GMW8 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC5.64□□□□□ -1.51
BIVM-ERCC5R4GMW8 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
BIVM-ERCC5R4GMW8 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
BIVM-ERCC5R4GMW8 RNU1-140P-201ENST00000365040 165 ntBASIC5.64□□□□□ -1.51
BIVM-ERCC5R4GMW8 RNA5SP104-201ENST00000410989 118 ntBASIC5.64□□□□□ -1.51
BIVM-ERCC5R4GMW8 RPL23AP69-201ENST00000431134 458 ntBASIC5.64□□□□□ -1.51
BIVM-ERCC5R4GMW8 AC236972.1-201ENST00000433225 199 ntBASIC5.64□□□□□ -1.51
BIVM-ERCC5R4GMW8 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
BIVM-ERCC5R4GMW8 AC026333.2-201ENST00000542164 106 ntBASIC5.64□□□□□ -1.51
BIVM-ERCC5R4GMW8 AC004024.1-201ENST00000549244 247 ntBASIC5.64□□□□□ -1.51
BIVM-ERCC5R4GMW8 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.64□□□□□ -1.51
BIVM-ERCC5R4GMW8 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.64□□□□□ -1.51
BIVM-ERCC5R4GMW8 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.64□□□□□ -1.51
BIVM-ERCC5R4GMW8 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.64□□□□□ -1.51
BIVM-ERCC5R4GMW8 OTUD4P1-201ENST00000237841 3067 ntBASIC5.64□□□□□ -1.51
BIVM-ERCC5R4GMW8 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.64□□□□□ -1.51
BIVM-ERCC5R4GMW8 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.64□□□□□ -1.51
BIVM-ERCC5R4GMW8 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC5.64□□□□□ -1.51
BIVM-ERCC5R4GMW8 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
BIVM-ERCC5R4GMW8 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
BIVM-ERCC5R4GMW8 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.63□□□□□ -1.51
BIVM-ERCC5R4GMW8 SNORA44-201ENST00000384584 132 ntBASIC5.63□□□□□ -1.51
BIVM-ERCC5R4GMW8 HMGN1P24-201ENST00000412282 298 ntBASIC5.63□□□□□ -1.51
BIVM-ERCC5R4GMW8 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC5.63□□□□□ -1.51
BIVM-ERCC5R4GMW8 AL356535.1-201ENST00000440335 398 ntBASIC5.63□□□□□ -1.51
BIVM-ERCC5R4GMW8 RN7SL863P-201ENST00000462370 296 ntBASIC5.63□□□□□ -1.51
BIVM-ERCC5R4GMW8 AC096576.1-201ENST00000489014 359 ntBASIC5.63□□□□□ -1.51
BIVM-ERCC5R4GMW8 AC069499.1-201ENST00000489433 509 ntBASIC5.63□□□□□ -1.51
BIVM-ERCC5R4GMW8 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.63□□□□□ -1.51
BIVM-ERCC5R4GMW8 AL121594.4-201ENST00000556211 1196 ntBASIC5.63□□□□□ -1.51
BIVM-ERCC5R4GMW8 AC233702.9-201ENST00000581528 203 ntBASIC5.63□□□□□ -1.51
BIVM-ERCC5R4GMW8 AC074276.2-201ENST00000619891 348 ntBASIC5.63□□□□□ -1.51
BIVM-ERCC5R4GMW8 AP000542.2-201ENST00000623199 6179 ntBASIC5.63□□□□□ -1.51
BIVM-ERCC5R4GMW8 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.63□□□□□ -1.51
BIVM-ERCC5R4GMW8 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
BIVM-ERCC5R4GMW8 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC5.63□□□□□ -1.51
BIVM-ERCC5R4GMW8 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
BIVM-ERCC5R4GMW8 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
BIVM-ERCC5R4GMW8 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
BIVM-ERCC5R4GMW8 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
BIVM-ERCC5R4GMW8 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
BIVM-ERCC5R4GMW8 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.63□□□□□ -1.51
BIVM-ERCC5R4GMW8 MRPS18BP2-201ENST00000434310 759 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms