Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 U6.107-201ENST00000637108 79 ntBASIC3.84□□□□□ -1.79
NPIPA1Q9UND3 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.84□□□□□ -1.79
NPIPA1Q9UND3 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
NPIPA1Q9UND3 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.84□□□□□ -1.79
NPIPA1Q9UND3 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.84□□□□□ -1.79
NPIPA1Q9UND3 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NPIPA1Q9UND3 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
NPIPA1Q9UND3 RLIMP1-201ENST00000339626 1680 ntBASIC3.84□□□□□ -1.8
NPIPA1Q9UND3 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.84□□□□□ -1.8
NPIPA1Q9UND3 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
NPIPA1Q9UND3 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
NPIPA1Q9UND3 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 PNPT1P2-201ENST00000456768 2050 ntBASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 RNA5SP391-201ENST00000363456 119 ntBASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 RN7SKP44-201ENST00000363602 316 ntBASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 RNU1-85P-201ENST00000364127 164 ntBASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 ATF1P1-201ENST00000406040 927 ntBASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 MIR1179-201ENST00000408703 91 ntBASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 RN7SKP202-201ENST00000410439 330 ntBASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 AC005189.1-201ENST00000431286 310 ntBASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 HLA-N-201ENST00000437516 135 ntBASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 RPL23AP46-201ENST00000438548 490 ntBASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 AC069285.2-201ENST00000440210 275 ntBASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 AC079804.1-201ENST00000461922 436 ntBASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 RPS29P19-201ENST00000479709 171 ntBASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 AL035404.1-201ENST00000497982 568 ntBASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 AC020593.1-201ENST00000507399 299 ntBASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 AC010468.3-201ENST00000508225 458 ntBASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 AC006499.6-201ENST00000511169 607 ntBASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 SAP18P1-201ENST00000512058 390 ntBASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 COX6B1P6-201ENST00000522347 255 ntBASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 AC087272.1-201ENST00000523624 533 ntBASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 AL161713.1-201ENST00000555538 145 ntBASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 GLRXP2-201ENST00000555594 321 ntBASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 OR6R2P-201ENST00000609216 300 ntBASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 AP001033.2-201ENST00000609701 1003 ntBASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 AL392048.1-201ENST00000613946 534 ntBASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 AL356863.1-201ENST00000623378 1080 ntBASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 AP006248.3-201ENST00000623580 594 ntBASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NPIPA1Q9UND3 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 AC007529.1-201ENST00000418574 2178 ntBASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 RNU6-650P-201ENST00000365658 111 ntBASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 RNU11-4P-201ENST00000391149 133 ntBASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 ENSAP1-201ENST00000392855 326 ntBASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 AC004022.2-201ENST00000413824 193 ntBASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 PNRC2P1-201ENST00000423940 420 ntBASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 BMS1P19-201ENST00000433925 393 ntBASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 RPL21P89-201ENST00000444021 467 ntBASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 YWHAQP9-201ENST00000445891 512 ntBASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 Z95327.1-201ENST00000446082 482 ntBASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 RPL5P32-201ENST00000454085 879 ntBASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 MTND2P30-201ENST00000456663 382 ntBASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 RPL23AP2-201ENST00000471227 466 ntBASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 RN7SL132P-201ENST00000478131 296 ntBASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 AC104164.2-201ENST00000496953 495 ntBASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 HPRT1P2-201ENST00000505250 544 ntBASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 COL6A4P2-205ENST00000509855 506 ntBASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 OR5H4P-201ENST00000510851 923 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms