Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 RNU6-254P-201ENST00000363377 107 ntBASIC8.42□□□□□ -1.06
RTN4Q9NQC3 Y_RNA.138-201ENST00000363462 102 ntBASIC8.42□□□□□ -1.06
RTN4Q9NQC3 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
RTN4Q9NQC3 GSTM1-203ENST00000369819 790 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
RTN4Q9NQC3 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
RTN4Q9NQC3 SNORA10B-201ENST00000384458 133 ntBASIC8.42□□□□□ -1.06
RTN4Q9NQC3 TRBV5-1-201ENST00000390381 652 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
RTN4Q9NQC3 RNY4P36-201ENST00000391116 96 ntBASIC8.42□□□□□ -1.06
RTN4Q9NQC3 OR2W4P-201ENST00000406496 926 ntBASIC8.42□□□□□ -1.06
RTN4Q9NQC3 RN7SKP119-201ENST00000410753 273 ntBASIC8.42□□□□□ -1.06
RTN4Q9NQC3 BX323014.1-201ENST00000412876 237 ntBASIC8.42□□□□□ -1.06
RTN4Q9NQC3 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC8.42□□□□□ -1.06
RTN4Q9NQC3 AC110995.1-202ENST00000422914 860 ntTSL 3 BASIC8.42□□□□□ -1.06
RTN4Q9NQC3 EEF1A1P27-201ENST00000429983 1135 ntBASIC8.42□□□□□ -1.06
RTN4Q9NQC3 HMGB3P24-201ENST00000433260 622 ntBASIC8.42□□□□□ -1.06
RTN4Q9NQC3 Y_RNA.639-201ENST00000458981 102 ntBASIC8.42□□□□□ -1.06
RTN4Q9NQC3 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC8.42□□□□□ -1.06
RTN4Q9NQC3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC8.42□□□□□ -1.06
RTN4Q9NQC3 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC8.42□□□□□ -1.06
RTN4Q9NQC3 AC104136.1-201ENST00000512969 394 ntBASIC8.42□□□□□ -1.06
RTN4Q9NQC3 AC024022.1-203ENST00000515392 478 ntTSL 3 BASIC8.42□□□□□ -1.06
RTN4Q9NQC3 IGHVIII-47-1-201ENST00000518187 331 ntBASIC8.42□□□□□ -1.06
RTN4Q9NQC3 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC8.42□□□□□ -1.06
RTN4Q9NQC3 SAA3P-201ENST00000533267 365 ntBASIC8.42□□□□□ -1.06
RTN4Q9NQC3 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC8.42□□□□□ -1.06
RTN4Q9NQC3 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC8.42□□□□□ -1.06
RTN4Q9NQC3 BNIP3P5-201ENST00000562290 498 ntBASIC8.42□□□□□ -1.06
RTN4Q9NQC3 DNM1P34-202ENST00000567850 315 ntBASIC8.42□□□□□ -1.06
RTN4Q9NQC3 TTN-AS1-210ENST00000578746 677 ntTSL 3 BASIC8.42□□□□□ -1.06
RTN4Q9NQC3 RN7SL49P-201ENST00000581392 298 ntBASIC8.42□□□□□ -1.06
RTN4Q9NQC3 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC8.42□□□□□ -1.06
RTN4Q9NQC3 MIR5690-201ENST00000583739 73 ntBASIC8.42□□□□□ -1.06
RTN4Q9NQC3 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC8.42□□□□□ -1.06
RTN4Q9NQC3 AC067852.3-201ENST00000589177 561 ntBASIC8.42□□□□□ -1.06
RTN4Q9NQC3 AL162730.1-201ENST00000605734 292 ntBASIC8.42□□□□□ -1.06
RTN4Q9NQC3 AC084781.2-201ENST00000615568 161 ntBASIC8.42□□□□□ -1.06
RTN4Q9NQC3 LZTS1-204ENST00000616228 231 ntTSL 2 BASIC8.42□□□□□ -1.06
RTN4Q9NQC3 AC006065.5-201ENST00000623427 349 ntBASIC8.42□□□□□ -1.06
RTN4Q9NQC3 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC8.42□□□□□ -1.06
RTN4Q9NQC3 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
RTN4Q9NQC3 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC8.42□□□□□ -1.06
RTN4Q9NQC3 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC8.42□□□□□ -1.06
RTN4Q9NQC3 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC8.42□□□□□ -1.06
RTN4Q9NQC3 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RTN4Q9NQC3 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RTN4Q9NQC3 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
RTN4Q9NQC3 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC8.42□□□□□ -1.06
RTN4Q9NQC3 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RTN4Q9NQC3 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RTN4Q9NQC3 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RTN4Q9NQC3 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
RTN4Q9NQC3 TNPO1P2-201ENST00000426249 2665 ntBASIC8.41□□□□□ -1.06
RTN4Q9NQC3 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RTN4Q9NQC3 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RTN4Q9NQC3 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RTN4Q9NQC3 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RTN4Q9NQC3 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC8.41□□□□□ -1.06
RTN4Q9NQC3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC8.41□□□□□ -1.06
RTN4Q9NQC3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
RTN4Q9NQC3 Y_RNA.579-201ENST00000390939 94 ntBASIC8.41□□□□□ -1.06
RTN4Q9NQC3 SNORD70.1-201ENST00000391007 85 ntBASIC8.41□□□□□ -1.06
RTN4Q9NQC3 AC023669.1-201ENST00000414915 524 ntTSL 3 BASIC8.41□□□□□ -1.06
RTN4Q9NQC3 AL590730.1-202ENST00000418875 321 ntTSL 2 BASIC8.41□□□□□ -1.06
RTN4Q9NQC3 VNN3-208ENST00000427187 1214 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RTN4Q9NQC3 RPL26P34-201ENST00000431005 451 ntBASIC8.41□□□□□ -1.06
RTN4Q9NQC3 OR3B1P-201ENST00000437536 893 ntBASIC8.41□□□□□ -1.06
RTN4Q9NQC3 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC8.41□□□□□ -1.06
RTN4Q9NQC3 RPL23AP89-201ENST00000439324 255 ntBASIC8.41□□□□□ -1.06
RTN4Q9NQC3 HMGB3P11-201ENST00000440127 604 ntBASIC8.41□□□□□ -1.06
RTN4Q9NQC3 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC8.41□□□□□ -1.06
RTN4Q9NQC3 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC8.41□□□□□ -1.06
RTN4Q9NQC3 RPL7AP71-201ENST00000451120 739 ntBASIC8.41□□□□□ -1.06
RTN4Q9NQC3 NIPA2P5-201ENST00000452282 464 ntBASIC8.41□□□□□ -1.06
RTN4Q9NQC3 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC8.41□□□□□ -1.06
RTN4Q9NQC3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC8.41□□□□□ -1.06
RTN4Q9NQC3 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC8.41□□□□□ -1.06
RTN4Q9NQC3 AP000911.4-201ENST00000532272 516 ntTSL 4 BASIC8.41□□□□□ -1.06
RTN4Q9NQC3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC8.41□□□□□ -1.06
RTN4Q9NQC3 IMMP1LP2-201ENST00000552954 492 ntBASIC8.41□□□□□ -1.06
RTN4Q9NQC3 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC8.41□□□□□ -1.06
RTN4Q9NQC3 IGHV1OR15-4-201ENST00000560037 348 ntBASIC8.41□□□□□ -1.06
RTN4Q9NQC3 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC8.41□□□□□ -1.06
RTN4Q9NQC3 AC145423.1-201ENST00000605712 336 ntBASIC8.41□□□□□ -1.06
RTN4Q9NQC3 AL627309.6-201ENST00000606857 840 ntBASIC8.41□□□□□ -1.06
RTN4Q9NQC3 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC8.41□□□□□ -1.06
RTN4Q9NQC3 FTH1-212ENST00000620041 825 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RTN4Q9NQC3 MIR6834-201ENST00000622807 81 ntBASIC8.41□□□□□ -1.06
RTN4Q9NQC3 AC134981.1-201ENST00000628076 348 ntBASIC8.41□□□□□ -1.06
RTN4Q9NQC3 KLF8-206ENST00000640927 1150 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RTN4Q9NQC3 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC8.41□□□□□ -1.06
RTN4Q9NQC3 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RTN4Q9NQC3 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
RTN4Q9NQC3 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
RTN4Q9NQC3 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
RTN4Q9NQC3 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RTN4Q9NQC3 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
RTN4Q9NQC3 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
RTN4Q9NQC3 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC8.4□□□□□ -1.06
RTN4Q9NQC3 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RTN4Q9NQC3 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC8.4□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms