Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 QRSL1P2-201ENST00000418582 964 ntBASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 PAICSP7-201ENST00000419829 962 ntBASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 AC004448.2-201ENST00000422360 586 ntBASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 RPEP3-201ENST00000425462 676 ntBASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 AC092162.1-201ENST00000432828 434 ntBASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 AC000111.2-201ENST00000448200 210 ntBASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 AC109327.1-201ENST00000471666 403 ntBASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 RNA5SP360-201ENST00000516555 118 ntBASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 RN7SL802P-201ENST00000577858 299 ntBASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 AP001160.4-201ENST00000596971 382 ntBASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 AL035411.2-201ENST00000604022 421 ntBASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 AL121932.1-201ENST00000605542 214 ntBASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 AC106052.1-201ENST00000608029 497 ntBASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 AP005137.2-201ENST00000609238 400 ntBASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 AL355816.2-201ENST00000610049 647 ntBASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 AC009237.15-201ENST00000610252 501 ntBASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 SNX18P1Y-201ENST00000616231 511 ntBASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 AL157770.1-201ENST00000623049 439 ntBASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 MFSD8-245ENST00000641743 948 ntBASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 AC017104.4-201ENST00000636283 1592 ntBASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
POLR1BQ9H9Y6 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 AC008758.3-201ENST00000507003 1829 ntBASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 ZNF29P-201ENST00000225587 168 ntBASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 AP000568.1-201ENST00000282964 442 ntBASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 RNA5SP388-201ENST00000362584 119 ntBASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 RNU1-20P-201ENST00000363314 162 ntBASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 SNORA57.1-201ENST00000391227 145 ntBASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 AL136310.1-201ENST00000404926 654 ntBASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 CEACAMP8-201ENST00000413902 580 ntBASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 PRELID3BP11-201ENST00000414230 479 ntBASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 AC092648.1-201ENST00000425870 423 ntBASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 USP12PY-201ENST00000427677 1064 ntBASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 AC073052.1-201ENST00000440417 714 ntBASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 AC112492.1-201ENST00000449607 712 ntBASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 ZNF886P-201ENST00000450781 723 ntBASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 RPS6P2-201ENST00000454208 705 ntBASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 AL049839.1-201ENST00000556151 657 ntBASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 AC010857.1-201ENST00000606398 594 ntBASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 AL078595.3-201ENST00000623815 1166 ntBASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 AC011944.2-201ENST00000624440 683 ntBASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 AL049536.1-201ENST00000625043 744 ntBASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 AC055839.1-201ENST00000634467 498 ntBASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 AC009951.1-201ENST00000623674 2614 ntBASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 AL442639.1-201ENST00000625030 1899 ntBASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
POLR1BQ9H9Y6 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 AC005261.4-201ENST00000600047 1385 ntBASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 HMGB1P5-201ENST00000255320 642 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms