Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AL139811.1-201ENST00000424779 2299 ntBASIC4.41□□□□□ -1.7
CCSER1Q9C0I3 HMGB1P10-201ENST00000395823 563 ntBASIC4.41□□□□□ -1.7
CCSER1Q9C0I3 HMGB1P13-201ENST00000406019 642 ntBASIC4.41□□□□□ -1.7
CCSER1Q9C0I3 RNU4-6P-201ENST00000410804 122 ntBASIC4.41□□□□□ -1.7
CCSER1Q9C0I3 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.41□□□□□ -1.7
CCSER1Q9C0I3 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.41□□□□□ -1.7
CCSER1Q9C0I3 AL035458.1-201ENST00000433096 585 ntBASIC4.41□□□□□ -1.7
CCSER1Q9C0I3 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.41□□□□□ -1.7
CCSER1Q9C0I3 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
CCSER1Q9C0I3 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.41□□□□□ -1.7
CCSER1Q9C0I3 AC069499.1-201ENST00000489433 509 ntBASIC4.41□□□□□ -1.7
CCSER1Q9C0I3 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCSER1Q9C0I3 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.41□□□□□ -1.7
CCSER1Q9C0I3 OR8R1P-201ENST00000543943 764 ntBASIC4.41□□□□□ -1.7
CCSER1Q9C0I3 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.41□□□□□ -1.7
CCSER1Q9C0I3 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.41□□□□□ -1.7
CCSER1Q9C0I3 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.41□□□□□ -1.7
CCSER1Q9C0I3 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.41□□□□□ -1.7
CCSER1Q9C0I3 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.41□□□□□ -1.7
CCSER1Q9C0I3 ABI1P1-201ENST00000603375 1120 ntBASIC4.41□□□□□ -1.7
CCSER1Q9C0I3 OR6R2P-201ENST00000609216 300 ntBASIC4.41□□□□□ -1.7
CCSER1Q9C0I3 AC104307.1-201ENST00000616142 196 ntBASIC4.41□□□□□ -1.7
CCSER1Q9C0I3 U6.48-201ENST00000618523 106 ntBASIC4.41□□□□□ -1.7
CCSER1Q9C0I3 AL139089.1-201ENST00000620372 975 ntBASIC4.41□□□□□ -1.7
CCSER1Q9C0I3 AC009452.1-201ENST00000640823 606 ntBASIC4.41□□□□□ -1.7
CCSER1Q9C0I3 ZNF90P1-201ENST00000480493 1951 ntBASIC4.41□□□□□ -1.7
CCSER1Q9C0I3 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCSER1Q9C0I3 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCSER1Q9C0I3 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
CCSER1Q9C0I3 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCSER1Q9C0I3 AC008725.1-201ENST00000605123 2263 ntBASIC4.41□□□□□ -1.7
CCSER1Q9C0I3 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CCSER1Q9C0I3 IQCB2P-201ENST00000401788 1633 ntBASIC4.4□□□□□ -1.7
CCSER1Q9C0I3 OR5T3-201ENST00000303059 1023 ntBASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 SNORD51.1-201ENST00000365405 77 ntBASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 RPL21P65-201ENST00000406094 466 ntBASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 MIR1193-201ENST00000408109 78 ntBASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 AL391219.1-201ENST00000422570 483 ntBASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 MTND2P11-201ENST00000423638 648 ntBASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 RPL30P3-201ENST00000424262 333 ntBASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 AL353093.1-201ENST00000441292 436 ntBASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 RPL37P3-201ENST00000456825 293 ntBASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 S100A11P1-201ENST00000477525 312 ntBASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 TPT1P3-201ENST00000492841 512 ntBASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 OR4A2P-201ENST00000527276 913 ntBASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 AC084824.1-201ENST00000550917 1005 ntBASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 AC068790.5-201ENST00000602741 355 ntBASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 AL390816.3-201ENST00000604527 1066 ntBASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 AC103858.2-201ENST00000621471 543 ntBASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 ATE1-AS1-202ENST00000636460 506 ntBASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 AP002001.2-201ENST00000529025 1469 ntBASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 AL353743.4-201ENST00000422653 1547 ntBASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCSER1Q9C0I3 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCSER1Q9C0I3 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CCSER1Q9C0I3 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCSER1Q9C0I3 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCSER1Q9C0I3 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.39□□□□□ -1.71
CCSER1Q9C0I3 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCSER1Q9C0I3 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.39□□□□□ -1.71
CCSER1Q9C0I3 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CCSER1Q9C0I3 MIR372-201ENST00000362225 67 ntBASIC4.39□□□□□ -1.71
CCSER1Q9C0I3 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCSER1Q9C0I3 MIR199A2-201ENST00000385289 110 ntBASIC4.39□□□□□ -1.71
CCSER1Q9C0I3 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCSER1Q9C0I3 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCSER1Q9C0I3 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.39□□□□□ -1.71
CCSER1Q9C0I3 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.39□□□□□ -1.71
CCSER1Q9C0I3 FO393419.3-201ENST00000428741 282 ntBASIC4.39□□□□□ -1.71
CCSER1Q9C0I3 AL117339.2-201ENST00000430475 180 ntBASIC4.39□□□□□ -1.71
CCSER1Q9C0I3 RPL21P89-201ENST00000444021 467 ntBASIC4.39□□□□□ -1.71
CCSER1Q9C0I3 RANP8-201ENST00000444720 713 ntBASIC4.39□□□□□ -1.71
CCSER1Q9C0I3 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.39□□□□□ -1.71
CCSER1Q9C0I3 RPL23AP2-201ENST00000471227 466 ntBASIC4.39□□□□□ -1.71
CCSER1Q9C0I3 AC018797.3-201ENST00000513388 1241 ntBASIC4.39□□□□□ -1.71
CCSER1Q9C0I3 AC026616.1-201ENST00000523157 525 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms