Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC009237.13-201ENST00000603193 276 ntBASIC5.72□□□□□ -1.49
TRIM55Q9BYV6 AC098614.4-201ENST00000607601 462 ntBASIC5.72□□□□□ -1.49
TRIM55Q9BYV6 MIR6809-201ENST00000612189 116 ntBASIC5.72□□□□□ -1.49
TRIM55Q9BYV6 MIR6793-201ENST00000612376 63 ntBASIC5.72□□□□□ -1.49
TRIM55Q9BYV6 AC009237.17-201ENST00000618111 748 ntBASIC5.72□□□□□ -1.49
TRIM55Q9BYV6 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM55Q9BYV6 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM55Q9BYV6 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM55Q9BYV6 AC099654.12-201ENST00000639868 649 ntBASIC5.72□□□□□ -1.49
TRIM55Q9BYV6 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM55Q9BYV6 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM55Q9BYV6 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM55Q9BYV6 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.72□□□□□ -1.49
TRIM55Q9BYV6 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
TRIM55Q9BYV6 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.71□□□□□ -1.49
TRIM55Q9BYV6 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
TRIM55Q9BYV6 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 MTCO1P17-201ENST00000411522 491 ntBASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 AL357752.1-201ENST00000412817 349 ntBASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 AL035410.1-201ENST00000427409 427 ntBASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 RPS12P17-201ENST00000438591 377 ntBASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 HSPE1P28-201ENST00000443139 211 ntBASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 LINC02210-201ENST00000444561 288 ntBASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 RPL7P36-201ENST00000444633 681 ntBASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 AP000542.1-201ENST00000448473 371 ntBASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 snoU109.1-201ENST00000459339 135 ntBASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 AC105384.2-201ENST00000508433 640 ntBASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 SCARNA18.1-201ENST00000516330 83 ntBASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 AC027308.1-201ENST00000517993 110 ntBASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 AC112191.2-201ENST00000522428 333 ntBASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 OR5G4P-201ENST00000525251 760 ntBASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 AC090022.1-201ENST00000546569 311 ntBASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 NTS-203ENST00000551529 801 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 RPL23AP92-201ENST00000603609 255 ntBASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 AC138749.5-201ENST00000611461 208 ntBASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 RN7SL787P-201ENST00000613000 284 ntBASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 AC022467.1-201ENST00000614738 749 ntBASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 AC008250.2-201ENST00000615261 205 ntBASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 AC116165.2-201ENST00000616705 206 ntBASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 AC108479.2-201ENST00000617314 601 ntBASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 AC095031.1-201ENST00000623685 672 ntBASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 FAM157B-203ENST00000639350 358 ntBASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 AC006484.1-201ENST00000435086 1884 ntBASIC5.71□□□□□ -1.5
TRIM55Q9BYV6 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 AL450326.2-201ENST00000421913 1962 ntBASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 RNU1-150P-201ENST00000362491 162 ntBASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 RNU6-259P-201ENST00000383999 107 ntBASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 U3.25-201ENST00000391209 220 ntBASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 RPL31P1-201ENST00000398116 372 ntBASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 AL592293.2-201ENST00000422292 996 ntBASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 RPS20P1-201ENST00000434853 354 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms