Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 RNU1-20P-201ENST00000363314 162 ntBASIC3.56□□□□□ -1.84
VGLL1Q99990 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
VGLL1Q99990 Y_RNA.408-201ENST00000383987 102 ntBASIC3.56□□□□□ -1.84
VGLL1Q99990 GSTA8P-201ENST00000404253 637 ntBASIC3.56□□□□□ -1.84
VGLL1Q99990 AL021407.1-201ENST00000404531 386 ntBASIC3.56□□□□□ -1.84
VGLL1Q99990 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.56□□□□□ -1.84
VGLL1Q99990 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC3.56□□□□□ -1.84
VGLL1Q99990 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC3.56□□□□□ -1.84
VGLL1Q99990 LINC00993-201ENST00000420453 540 ntBASIC3.56□□□□□ -1.84
VGLL1Q99990 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.56□□□□□ -1.84
VGLL1Q99990 AC019178.2-201ENST00000423595 505 ntBASIC3.56□□□□□ -1.84
VGLL1Q99990 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC3.56□□□□□ -1.84
VGLL1Q99990 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.56□□□□□ -1.84
VGLL1Q99990 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.56□□□□□ -1.84
VGLL1Q99990 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.56□□□□□ -1.84
VGLL1Q99990 PPIAP13-201ENST00000434706 478 ntBASIC3.56□□□□□ -1.84
VGLL1Q99990 CYCSP11-201ENST00000436426 315 ntBASIC3.56□□□□□ -1.84
VGLL1Q99990 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.56□□□□□ -1.84
VGLL1Q99990 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC3.56□□□□□ -1.84
VGLL1Q99990 HMGB1P48-201ENST00000446155 598 ntBASIC3.56□□□□□ -1.84
VGLL1Q99990 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.56□□□□□ -1.84
VGLL1Q99990 MTCO2P7-201ENST00000446518 666 ntBASIC3.56□□□□□ -1.84
VGLL1Q99990 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.56□□□□□ -1.84
VGLL1Q99990 RPL21P134-201ENST00000453468 483 ntBASIC3.56□□□□□ -1.84
VGLL1Q99990 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.56□□□□□ -1.84
VGLL1Q99990 AL109741.2-201ENST00000455561 343 ntBASIC3.56□□□□□ -1.84
VGLL1Q99990 RPL31P3-201ENST00000458430 332 ntBASIC3.56□□□□□ -1.84
VGLL1Q99990 AC018638.3-201ENST00000461273 132 ntBASIC3.56□□□□□ -1.84
VGLL1Q99990 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
VGLL1Q99990 RN7SL41P-201ENST00000476144 297 ntBASIC3.56□□□□□ -1.84
VGLL1Q99990 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC3.56□□□□□ -1.84
VGLL1Q99990 AC025445.1-201ENST00000502728 300 ntBASIC3.56□□□□□ -1.84
VGLL1Q99990 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.56□□□□□ -1.84
VGLL1Q99990 AC112198.1-201ENST00000505369 1220 ntBASIC3.56□□□□□ -1.84
VGLL1Q99990 HSPE1P23-201ENST00000509838 286 ntBASIC3.56□□□□□ -1.84
VGLL1Q99990 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
VGLL1Q99990 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC3.56□□□□□ -1.84
VGLL1Q99990 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
VGLL1Q99990 AC004980.4-201ENST00000513375 203 ntBASIC3.56□□□□□ -1.84
VGLL1Q99990 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC3.56□□□□□ -1.84
VGLL1Q99990 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC3.56□□□□□ -1.84
VGLL1Q99990 RNA5SP154-201ENST00000516193 111 ntBASIC3.56□□□□□ -1.84
VGLL1Q99990 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.56□□□□□ -1.84
VGLL1Q99990 MAL2-201ENST00000522112 573 ntTSL 4 BASIC3.56□□□□□ -1.84
VGLL1Q99990 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.56□□□□□ -1.84
VGLL1Q99990 AP000619.3-201ENST00000535634 1127 ntBASIC3.56□□□□□ -1.84
VGLL1Q99990 ELOCP32-201ENST00000548625 324 ntBASIC3.56□□□□□ -1.84
VGLL1Q99990 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC3.56□□□□□ -1.84
VGLL1Q99990 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.56□□□□□ -1.84
VGLL1Q99990 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.56□□□□□ -1.84
VGLL1Q99990 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.56□□□□□ -1.84
VGLL1Q99990 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.56□□□□□ -1.84
VGLL1Q99990 AC015912.2-201ENST00000571053 181 ntBASIC3.56□□□□□ -1.84
VGLL1Q99990 AC103987.3-201ENST00000582071 292 ntBASIC3.56□□□□□ -1.84
VGLL1Q99990 AC209154.1-201ENST00000582156 337 ntBASIC3.56□□□□□ -1.84
VGLL1Q99990 VN1R88P-201ENST00000596787 292 ntBASIC3.56□□□□□ -1.84
VGLL1Q99990 AP001981.2-201ENST00000603241 418 ntBASIC3.56□□□□□ -1.84
VGLL1Q99990 AL031281.1-201ENST00000604049 488 ntBASIC3.56□□□□□ -1.84
VGLL1Q99990 AC010738.1-201ENST00000604970 987 ntBASIC3.56□□□□□ -1.84
VGLL1Q99990 AC009163.6-201ENST00000612367 342 ntBASIC3.56□□□□□ -1.84
VGLL1Q99990 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.56□□□□□ -1.84
VGLL1Q99990 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
VGLL1Q99990 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
VGLL1Q99990 CGA-206ENST00000630630 832 ntTSL 2 BASIC3.56□□□□□ -1.84
VGLL1Q99990 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.56□□□□□ -1.84
VGLL1Q99990 ZNRD1ASP-221ENST00000637794 1074 ntBASIC3.56□□□□□ -1.84
VGLL1Q99990 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.56□□□□□ -1.84
VGLL1Q99990 CASC19-222ENST00000641321 1173 ntBASIC3.56□□□□□ -1.84
VGLL1Q99990 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
VGLL1Q99990 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
VGLL1Q99990 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
VGLL1Q99990 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
VGLL1Q99990 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
VGLL1Q99990 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
VGLL1Q99990 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
VGLL1Q99990 AC006971.1-201ENST00000407916 4486 ntBASIC3.56□□□□□ -1.84
VGLL1Q99990 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
VGLL1Q99990 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.56□□□□□ -1.84
VGLL1Q99990 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VGLL1Q99990 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
VGLL1Q99990 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.55□□□□□ -1.84
VGLL1Q99990 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.55□□□□□ -1.84
VGLL1Q99990 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.55□□□□□ -1.84
VGLL1Q99990 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VGLL1Q99990 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VGLL1Q99990 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.55□□□□□ -1.84
VGLL1Q99990 DDX43P2-201ENST00000604753 1354 ntBASIC3.55□□□□□ -1.84
VGLL1Q99990 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.55□□□□□ -1.84
VGLL1Q99990 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VGLL1Q99990 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
VGLL1Q99990 RPL23P2-201ENST00000320371 421 ntBASIC3.55□□□□□ -1.84
VGLL1Q99990 RNA5SP502-201ENST00000362694 119 ntBASIC3.55□□□□□ -1.84
VGLL1Q99990 SNORA62.2-201ENST00000364672 152 ntBASIC3.55□□□□□ -1.84
VGLL1Q99990 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VGLL1Q99990 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
VGLL1Q99990 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
VGLL1Q99990 AL138880.1-201ENST00000405824 642 ntBASIC3.55□□□□□ -1.84
VGLL1Q99990 SNORA11C-201ENST00000408532 129 ntBASIC3.55□□□□□ -1.84
VGLL1Q99990 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.55□□□□□ -1.84
VGLL1Q99990 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms