Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
COL21A1Q96P44 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.7□□□□□ -1.82
COL21A1Q96P44 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
COL21A1Q96P44 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.7□□□□□ -1.82
COL21A1Q96P44 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.7□□□□□ -1.82
COL21A1Q96P44 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
COL21A1Q96P44 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.69□□□□□ -1.82
COL21A1Q96P44 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL21A1Q96P44 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
COL21A1Q96P44 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
COL21A1Q96P44 MIR421-201ENST00000365696 85 ntBASIC3.69□□□□□ -1.82
COL21A1Q96P44 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.69□□□□□ -1.82
COL21A1Q96P44 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL21A1Q96P44 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL21A1Q96P44 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
COL21A1Q96P44 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.69□□□□□ -1.82
COL21A1Q96P44 RNU4-6P-201ENST00000410804 122 ntBASIC3.69□□□□□ -1.82
COL21A1Q96P44 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.69□□□□□ -1.82
COL21A1Q96P44 HIGD1AP4-201ENST00000430194 280 ntBASIC3.69□□□□□ -1.82
COL21A1Q96P44 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.69□□□□□ -1.82
COL21A1Q96P44 OR4C10P-201ENST00000434991 931 ntBASIC3.69□□□□□ -1.82
COL21A1Q96P44 HMGB1P37-201ENST00000439613 609 ntBASIC3.69□□□□□ -1.82
COL21A1Q96P44 AC092809.1-201ENST00000441469 474 ntBASIC3.69□□□□□ -1.82
COL21A1Q96P44 AC006326.1-201ENST00000445465 787 ntBASIC3.69□□□□□ -1.82
COL21A1Q96P44 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.69□□□□□ -1.82
COL21A1Q96P44 AL162151.2-201ENST00000448875 158 ntBASIC3.69□□□□□ -1.82
COL21A1Q96P44 RPS11P1-201ENST00000451072 473 ntBASIC3.69□□□□□ -1.82
COL21A1Q96P44 AP002345.1-201ENST00000456493 928 ntBASIC3.69□□□□□ -1.82
COL21A1Q96P44 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.69□□□□□ -1.82
COL21A1Q96P44 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.69□□□□□ -1.82
COL21A1Q96P44 AC010683.1-201ENST00000473673 378 ntBASIC3.69□□□□□ -1.82
COL21A1Q96P44 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.69□□□□□ -1.82
COL21A1Q96P44 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.69□□□□□ -1.82
COL21A1Q96P44 RNU6-1308P-201ENST00000516817 103 ntBASIC3.69□□□□□ -1.82
COL21A1Q96P44 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.69□□□□□ -1.82
COL21A1Q96P44 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.69□□□□□ -1.82
COL21A1Q96P44 DEFB109D-201ENST00000529497 240 ntBASIC3.69□□□□□ -1.82
COL21A1Q96P44 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.69□□□□□ -1.82
COL21A1Q96P44 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.69□□□□□ -1.82
COL21A1Q96P44 AGGF1P6-201ENST00000569213 976 ntBASIC3.69□□□□□ -1.82
COL21A1Q96P44 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.69□□□□□ -1.82
COL21A1Q96P44 MIR4512-201ENST00000583257 77 ntBASIC3.69□□□□□ -1.82
COL21A1Q96P44 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
COL21A1Q96P44 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.69□□□□□ -1.82
COL21A1Q96P44 AL109618.2-201ENST00000605527 211 ntBASIC3.69□□□□□ -1.82
COL21A1Q96P44 AC016911.1-201ENST00000613297 452 ntBASIC3.69□□□□□ -1.82
COL21A1Q96P44 MIR7973-1-201ENST00000614683 76 ntBASIC3.69□□□□□ -1.82
COL21A1Q96P44 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL21A1Q96P44 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.69□□□□□ -1.82
COL21A1Q96P44 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.69□□□□□ -1.82
COL21A1Q96P44 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
COL21A1Q96P44 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
COL21A1Q96P44 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.69□□□□□ -1.82
COL21A1Q96P44 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
COL21A1Q96P44 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
COL21A1Q96P44 RPS4XP5-202ENST00000449995 1334 ntBASIC3.69□□□□□ -1.82
COL21A1Q96P44 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL21A1Q96P44 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL21A1Q96P44 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL21A1Q96P44 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL21A1Q96P44 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
COL21A1Q96P44 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
COL21A1Q96P44 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
COL21A1Q96P44 RNU6-152P-201ENST00000384037 107 ntBASIC3.68□□□□□ -1.82
COL21A1Q96P44 SNORA11C-201ENST00000408532 129 ntBASIC3.68□□□□□ -1.82
COL21A1Q96P44 RNU6-628P-201ENST00000410675 107 ntBASIC3.68□□□□□ -1.82
COL21A1Q96P44 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.68□□□□□ -1.82
COL21A1Q96P44 YY1P1-201ENST00000427625 668 ntBASIC3.68□□□□□ -1.82
COL21A1Q96P44 NPM1P34-201ENST00000428821 893 ntBASIC3.68□□□□□ -1.82
COL21A1Q96P44 AL117339.2-201ENST00000430475 180 ntBASIC3.68□□□□□ -1.82
COL21A1Q96P44 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.68□□□□□ -1.82
COL21A1Q96P44 NUTF2P7-201ENST00000453086 375 ntBASIC3.68□□□□□ -1.82
COL21A1Q96P44 RPL21P71-201ENST00000465598 459 ntBASIC3.68□□□□□ -1.82
COL21A1Q96P44 RPL7P24-201ENST00000493052 752 ntBASIC3.68□□□□□ -1.82
COL21A1Q96P44 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.68□□□□□ -1.82
COL21A1Q96P44 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.68□□□□□ -1.82
COL21A1Q96P44 AC004069.2-201ENST00000505438 1114 ntBASIC3.68□□□□□ -1.82
COL21A1Q96P44 AC026402.1-201ENST00000513642 170 ntBASIC3.68□□□□□ -1.82
COL21A1Q96P44 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.68□□□□□ -1.82
COL21A1Q96P44 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.68□□□□□ -1.82
COL21A1Q96P44 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.68□□□□□ -1.82
COL21A1Q96P44 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
COL21A1Q96P44 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.68□□□□□ -1.82
COL21A1Q96P44 NPM1P47-201ENST00000560843 856 ntBASIC3.68□□□□□ -1.82
COL21A1Q96P44 AL133457.1-201ENST00000564251 987 ntBASIC3.68□□□□□ -1.82
COL21A1Q96P44 AC009101.1-201ENST00000568135 242 ntBASIC3.68□□□□□ -1.82
COL21A1Q96P44 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.68□□□□□ -1.82
COL21A1Q96P44 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.68□□□□□ -1.82
COL21A1Q96P44 AC243654.2-201ENST00000612843 443 ntBASIC3.68□□□□□ -1.82
COL21A1Q96P44 AL139089.1-201ENST00000620372 975 ntBASIC3.68□□□□□ -1.82
COL21A1Q96P44 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.68□□□□□ -1.82
COL21A1Q96P44 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.68□□□□□ -1.82
COL21A1Q96P44 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL21A1Q96P44 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL21A1Q96P44 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
COL21A1Q96P44 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.68□□□□□ -1.82
COL21A1Q96P44 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL21A1Q96P44 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.67□□□□□ -1.82
COL21A1Q96P44 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL21A1Q96P44 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms