Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 HIGD1AP12-201ENST00000427832 281 ntBASIC5.61□□□□□ -1.51
SYNE4Q8N205 AC093716.1-201ENST00000435923 377 ntBASIC5.61□□□□□ -1.51
SYNE4Q8N205 AL133477.1-201ENST00000457472 514 ntBASIC5.61□□□□□ -1.51
SYNE4Q8N205 AC079203.1-201ENST00000487972 404 ntBASIC5.61□□□□□ -1.51
SYNE4Q8N205 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.61□□□□□ -1.51
SYNE4Q8N205 AC025459.1-201ENST00000504072 156 ntBASIC5.61□□□□□ -1.51
SYNE4Q8N205 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC5.61□□□□□ -1.51
SYNE4Q8N205 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE4Q8N205 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.61□□□□□ -1.51
SYNE4Q8N205 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.61□□□□□ -1.51
SYNE4Q8N205 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE4Q8N205 PDCL2P2-201ENST00000533651 189 ntBASIC5.61□□□□□ -1.51
SYNE4Q8N205 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.61□□□□□ -1.51
SYNE4Q8N205 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.61□□□□□ -1.51
SYNE4Q8N205 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.61□□□□□ -1.51
SYNE4Q8N205 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.61□□□□□ -1.51
SYNE4Q8N205 MTND4LP24-201ENST00000572277 291 ntBASIC5.61□□□□□ -1.51
SYNE4Q8N205 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.61□□□□□ -1.51
SYNE4Q8N205 AC078795.2-201ENST00000602835 1252 ntBASIC5.61□□□□□ -1.51
SYNE4Q8N205 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.61□□□□□ -1.51
SYNE4Q8N205 AP000254.1-201ENST00000609934 520 ntBASIC5.61□□□□□ -1.51
SYNE4Q8N205 AC073534.2-201ENST00000620377 381 ntBASIC5.61□□□□□ -1.51
SYNE4Q8N205 AP003072.4-201ENST00000624580 310 ntBASIC5.61□□□□□ -1.51
SYNE4Q8N205 AC007342.7-201ENST00000624610 2337 ntBASIC5.61□□□□□ -1.51
SYNE4Q8N205 AC092192.1-201ENST00000633154 1018 ntBASIC5.61□□□□□ -1.51
SYNE4Q8N205 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE4Q8N205 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE4Q8N205 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE4Q8N205 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE4Q8N205 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.6□□□□□ -1.51
SYNE4Q8N205 HSPD1P11-201ENST00000508643 1702 ntBASIC5.6□□□□□ -1.51
SYNE4Q8N205 MTND5P23-201ENST00000430812 1655 ntBASIC5.6□□□□□ -1.51
SYNE4Q8N205 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE4Q8N205 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE4Q8N205 AL672167.1-203ENST00000641299 2975 ntBASIC5.6□□□□□ -1.51
SYNE4Q8N205 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.6□□□□□ -1.51
SYNE4Q8N205 OR5P1P-201ENST00000299512 925 ntBASIC5.6□□□□□ -1.51
SYNE4Q8N205 MIR208A-201ENST00000362287 71 ntBASIC5.6□□□□□ -1.51
SYNE4Q8N205 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SYNE4Q8N205 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC5.6□□□□□ -1.51
SYNE4Q8N205 UBBP2-201ENST00000376781 231 ntBASIC5.6□□□□□ -1.51
SYNE4Q8N205 Y_RNA.559-201ENST00000384686 107 ntBASIC5.6□□□□□ -1.51
SYNE4Q8N205 SDHCP2-201ENST00000398565 501 ntBASIC5.6□□□□□ -1.51
SYNE4Q8N205 AL022722.2-201ENST00000402519 180 ntBASIC5.6□□□□□ -1.51
SYNE4Q8N205 RPL7P27-201ENST00000403775 720 ntBASIC5.6□□□□□ -1.51
SYNE4Q8N205 AL590084.1-201ENST00000407885 387 ntBASIC5.6□□□□□ -1.51
SYNE4Q8N205 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.6□□□□□ -1.51
SYNE4Q8N205 AC010385.1-201ENST00000412374 256 ntBASIC5.6□□□□□ -1.51
SYNE4Q8N205 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.6□□□□□ -1.51
SYNE4Q8N205 AC004022.2-201ENST00000413824 193 ntBASIC5.6□□□□□ -1.51
SYNE4Q8N205 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.6□□□□□ -1.51
SYNE4Q8N205 MTND4LP11-201ENST00000422184 280 ntBASIC5.6□□□□□ -1.51
SYNE4Q8N205 AC093084.1-201ENST00000424233 687 ntBASIC5.6□□□□□ -1.51
SYNE4Q8N205 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.6□□□□□ -1.51
SYNE4Q8N205 RPL23AP52-201ENST00000439311 478 ntBASIC5.6□□□□□ -1.51
SYNE4Q8N205 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE4Q8N205 HSFY6P-201ENST00000445573 403 ntBASIC5.6□□□□□ -1.51
SYNE4Q8N205 RPL34P26-201ENST00000445636 354 ntBASIC5.6□□□□□ -1.51
SYNE4Q8N205 BMI1P1-201ENST00000445879 941 ntBASIC5.6□□□□□ -1.51
SYNE4Q8N205 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.6□□□□□ -1.51
SYNE4Q8N205 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.6□□□□□ -1.51
SYNE4Q8N205 AC098583.1-201ENST00000480875 255 ntBASIC5.6□□□□□ -1.51
SYNE4Q8N205 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.6□□□□□ -1.51
SYNE4Q8N205 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC5.6□□□□□ -1.51
SYNE4Q8N205 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC5.6□□□□□ -1.51
SYNE4Q8N205 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.6□□□□□ -1.51
SYNE4Q8N205 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.6□□□□□ -1.51
SYNE4Q8N205 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.6□□□□□ -1.51
SYNE4Q8N205 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC5.6□□□□□ -1.51
SYNE4Q8N205 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.6□□□□□ -1.51
SYNE4Q8N205 MIR4444-1-201ENST00000581696 74 ntBASIC5.6□□□□□ -1.51
SYNE4Q8N205 AC022069.1-201ENST00000582910 658 ntBASIC5.6□□□□□ -1.51
SYNE4Q8N205 MIR4444-2-201ENST00000584390 74 ntBASIC5.6□□□□□ -1.51
SYNE4Q8N205 AL590229.1-201ENST00000603497 542 ntBASIC5.6□□□□□ -1.51
SYNE4Q8N205 LSM1P2-201ENST00000604911 322 ntBASIC5.6□□□□□ -1.51
SYNE4Q8N205 AC009237.15-201ENST00000610252 501 ntBASIC5.6□□□□□ -1.51
SYNE4Q8N205 SNX18P1Y-201ENST00000616231 511 ntBASIC5.6□□□□□ -1.51
SYNE4Q8N205 AC116165.2-201ENST00000616705 206 ntBASIC5.6□□□□□ -1.51
SYNE4Q8N205 AC073968.1-201ENST00000618594 637 ntBASIC5.6□□□□□ -1.51
SYNE4Q8N205 AC099842.1-201ENST00000619919 596 ntBASIC5.6□□□□□ -1.51
SYNE4Q8N205 AC091931.1-201ENST00000623488 728 ntBASIC5.6□□□□□ -1.51
SYNE4Q8N205 AC079248.2-201ENST00000623779 326 ntBASIC5.6□□□□□ -1.51
SYNE4Q8N205 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.6□□□□□ -1.51
SYNE4Q8N205 AC006065.6-201ENST00000625201 545 ntBASIC5.6□□□□□ -1.51
SYNE4Q8N205 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
SYNE4Q8N205 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE4Q8N205 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
SYNE4Q8N205 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE4Q8N205 AC245100.2-201ENST00000454544 1679 ntBASIC5.59□□□□□ -1.51
SYNE4Q8N205 LINC00622-201ENST00000562811 1570 ntBASIC5.59□□□□□ -1.51
SYNE4Q8N205 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SYNE4Q8N205 AC093671.1-201ENST00000624981 2929 ntBASIC5.59□□□□□ -1.51
SYNE4Q8N205 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.59□□□□□ -1.51
SYNE4Q8N205 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SYNE4Q8N205 MUC2-202ENST00000613187 4845 ntBASIC5.59□□□□□ -1.51
SYNE4Q8N205 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SYNE4Q8N205 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SYNE4Q8N205 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
SYNE4Q8N205 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SYNE4Q8N205 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms