Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 FKBP1BP1-201ENST00000553366 325 ntBASIC4.3□□□□□ -1.72
BEST3Q8N1M1 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.3□□□□□ -1.72
BEST3Q8N1M1 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.3□□□□□ -1.72
BEST3Q8N1M1 CYCSP40-201ENST00000575927 294 ntBASIC4.3□□□□□ -1.72
BEST3Q8N1M1 AP005119.2-201ENST00000579735 1105 ntBASIC4.3□□□□□ -1.72
BEST3Q8N1M1 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.3□□□□□ -1.72
BEST3Q8N1M1 MIR4697-201ENST00000582977 78 ntBASIC4.3□□□□□ -1.72
BEST3Q8N1M1 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.3□□□□□ -1.72
BEST3Q8N1M1 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.3□□□□□ -1.72
BEST3Q8N1M1 AP003973.1-201ENST00000604639 691 ntBASIC4.3□□□□□ -1.72
BEST3Q8N1M1 AL353600.1-201ENST00000608148 251 ntBASIC4.3□□□□□ -1.72
BEST3Q8N1M1 AC123768.4-201ENST00000616244 701 ntBASIC4.3□□□□□ -1.72
BEST3Q8N1M1 AC022509.4-201ENST00000621404 572 ntBASIC4.3□□□□□ -1.72
BEST3Q8N1M1 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.3□□□□□ -1.72
BEST3Q8N1M1 AL049536.1-201ENST00000625043 744 ntBASIC4.3□□□□□ -1.72
BEST3Q8N1M1 AC019226.2-201ENST00000625973 424 ntBASIC4.3□□□□□ -1.72
BEST3Q8N1M1 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.3□□□□□ -1.72
BEST3Q8N1M1 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.3□□□□□ -1.72
BEST3Q8N1M1 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
BEST3Q8N1M1 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
BEST3Q8N1M1 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
BEST3Q8N1M1 MAPK10-286ENST00000641208 8747 ntBASIC4.3□□□□□ -1.72
BEST3Q8N1M1 AC120338.1-201ENST00000625074 1541 ntBASIC4.3□□□□□ -1.72
BEST3Q8N1M1 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.3□□□□□ -1.72
BEST3Q8N1M1 AC139713.2-214ENST00000642059 1811 ntBASIC4.3□□□□□ -1.72
BEST3Q8N1M1 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
BEST3Q8N1M1 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 AC108467.2-201ENST00000617640 1597 ntBASIC4.29□□□□□ -1.72
BEST3Q8N1M1 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 RNU6-560P-201ENST00000364007 108 ntBASIC4.29□□□□□ -1.72
BEST3Q8N1M1 RNU6-1151P-201ENST00000384684 107 ntBASIC4.29□□□□□ -1.72
BEST3Q8N1M1 AP000580.1-201ENST00000404439 358 ntBASIC4.29□□□□□ -1.72
BEST3Q8N1M1 U3.35-201ENST00000408405 208 ntBASIC4.29□□□□□ -1.72
BEST3Q8N1M1 RN7SKP247-201ENST00000411094 308 ntBASIC4.29□□□□□ -1.72
BEST3Q8N1M1 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 E2F6P2-201ENST00000420708 748 ntBASIC4.29□□□□□ -1.72
BEST3Q8N1M1 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 PPIAP17-201ENST00000438507 471 ntBASIC4.29□□□□□ -1.72
BEST3Q8N1M1 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 HMGB1P48-201ENST00000446155 598 ntBASIC4.29□□□□□ -1.72
BEST3Q8N1M1 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 TPT1P12-201ENST00000448968 492 ntBASIC4.29□□□□□ -1.72
BEST3Q8N1M1 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 AC091951.3-201ENST00000504093 246 ntBASIC4.29□□□□□ -1.72
BEST3Q8N1M1 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 AC093755.1-201ENST00000512950 1023 ntBASIC4.29□□□□□ -1.72
BEST3Q8N1M1 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 RNU5A-4P-201ENST00000516588 111 ntBASIC4.29□□□□□ -1.72
BEST3Q8N1M1 RNA5SP135-201ENST00000517019 125 ntBASIC4.29□□□□□ -1.72
BEST3Q8N1M1 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 AC087477.6-201ENST00000559595 843 ntBASIC4.29□□□□□ -1.72
BEST3Q8N1M1 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 MIR4277-201ENST00000578298 84 ntBASIC4.29□□□□□ -1.72
BEST3Q8N1M1 AC124856.1-201ENST00000600819 896 ntBASIC4.29□□□□□ -1.72
BEST3Q8N1M1 MRPS35P3-201ENST00000603189 709 ntBASIC4.29□□□□□ -1.72
BEST3Q8N1M1 AC100847.1-201ENST00000611316 481 ntBASIC4.29□□□□□ -1.72
BEST3Q8N1M1 AC120349.3-201ENST00000624377 529 ntBASIC4.29□□□□□ -1.72
BEST3Q8N1M1 AC005332.5-201ENST00000591222 2919 ntBASIC4.29□□□□□ -1.72
BEST3Q8N1M1 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.29□□□□□ -1.72
BEST3Q8N1M1 PHKBP1-201ENST00000450951 1951 ntBASIC4.29□□□□□ -1.72
BEST3Q8N1M1 AC107027.3-201ENST00000565095 3473 ntBASIC4.29□□□□□ -1.72
BEST3Q8N1M1 AC000123.3-201ENST00000624029 4975 ntBASIC4.29□□□□□ -1.72
BEST3Q8N1M1 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
BEST3Q8N1M1 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
BEST3Q8N1M1 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
BEST3Q8N1M1 OR14L1P-202ENST00000641545 3009 ntBASIC4.28□□□□□ -1.72
BEST3Q8N1M1 AC108751.5-201ENST00000492880 1336 ntBASIC4.28□□□□□ -1.72
BEST3Q8N1M1 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
BEST3Q8N1M1 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
BEST3Q8N1M1 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
BEST3Q8N1M1 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms