Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 Y_RNA.222-201ENST00000364264 102 ntBASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 SNORA75B-201ENST00000384053 137 ntBASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 Y_RNA.485-201ENST00000384395 102 ntBASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 MIR514A2-201ENST00000385131 88 ntBASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 MIR514A3-201ENST00000385132 88 ntBASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 RNU6-823P-201ENST00000391042 103 ntBASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 RPS26P13-201ENST00000419030 330 ntBASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 CYCSP52-201ENST00000422857 310 ntBASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 FABP5P2-201ENST00000439042 408 ntBASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 AL606490.1-201ENST00000452266 765 ntBASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 RPL34P33-201ENST00000486062 334 ntBASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 RNU6-583P-201ENST00000516012 92 ntBASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 IGHV3-57-201ENST00000520143 280 ntBASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 IGHV3-76-201ENST00000522465 295 ntBASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 AC007448.1-201ENST00000582714 234 ntBASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 AP001029.3-201ENST00000588063 596 ntBASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 AC011445.2-201ENST00000599274 173 ntBASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 AC010620.2-201ENST00000600135 313 ntBASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 AC104763.2-201ENST00000604179 382 ntBASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 AC103858.2-201ENST00000621471 543 ntBASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 MIR193BHG-214ENST00000641765 509 ntBASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 AL359195.2-201ENST00000623657 4412 ntBASIC6.59□□□□□ -1.36
NPAS3Q8IXF0 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.36
NPAS3Q8IXF0 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
NPAS3Q8IXF0 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 Y_RNA.29-201ENST00000362570 113 ntBASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 SNORA51.1-201ENST00000363243 140 ntBASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 Y_RNA.152-201ENST00000363578 100 ntBASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 RN7SKP81-201ENST00000365603 331 ntBASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 RNU6-601P-201ENST00000384540 107 ntBASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 AC048351.1-201ENST00000420064 602 ntBASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 UQCRBP1-201ENST00000421129 336 ntBASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 AC130360.1-201ENST00000425489 1117 ntBASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 RPL23AP19-201ENST00000436229 369 ntBASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 AC002504.1-201ENST00000438281 691 ntBASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 SLC25A18P1-201ENST00000449385 454 ntBASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 AC005008.1-201ENST00000456151 612 ntBASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 AC011005.2-201ENST00000487324 359 ntBASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 RN7SKP98-201ENST00000517070 156 ntBASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 IGHV3-63-201ENST00000518422 341 ntBASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 AC130365.2-201ENST00000525882 1201 ntBASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 HMGB3P26-201ENST00000560051 582 ntBASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 AC068768.2-201ENST00000602352 343 ntBASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 AP001823.1-201ENST00000604056 1003 ntBASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 AC139493.1-201ENST00000604368 397 ntBASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 MIR6886-201ENST00000619864 61 ntBASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
NPAS3Q8IXF0 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.57□□□□□ -1.36
NPAS3Q8IXF0 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms