Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 SNORD39.4-201ENST00000620099 78 ntBASIC5.2□□□□□ -1.58
CDC42BPAQ5VT25 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.2□□□□□ -1.58
CDC42BPAQ5VT25 OR6C71P-202ENST00000641886 1107 ntBASIC5.2□□□□□ -1.58
CDC42BPAQ5VT25 AL732372.2-225ENST00000642124 456 ntBASIC5.2□□□□□ -1.58
CDC42BPAQ5VT25 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.2□□□□□ -1.58
CDC42BPAQ5VT25 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDC42BPAQ5VT25 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CDC42BPAQ5VT25 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.2□□□□□ -1.58
CDC42BPAQ5VT25 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.2□□□□□ -1.58
CDC42BPAQ5VT25 USP12PY-201ENST00000427677 1064 ntBASIC5.2□□□□□ -1.58
CDC42BPAQ5VT25 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC5.2□□□□□ -1.58
CDC42BPAQ5VT25 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC5.2□□□□□ -1.58
CDC42BPAQ5VT25 OR5AP1P-201ENST00000529730 940 ntBASIC5.2□□□□□ -1.58
CDC42BPAQ5VT25 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.2□□□□□ -1.58
CDC42BPAQ5VT25 AC092868.3-201ENST00000560515 784 ntBASIC5.2□□□□□ -1.58
CDC42BPAQ5VT25 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.2□□□□□ -1.58
CDC42BPAQ5VT25 AC020914.4-201ENST00000597690 277 ntBASIC5.2□□□□□ -1.58
CDC42BPAQ5VT25 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.19□□□□□ -1.58
CDC42BPAQ5VT25 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDC42BPAQ5VT25 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
CDC42BPAQ5VT25 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
CDC42BPAQ5VT25 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDC42BPAQ5VT25 Y_RNA.510-201ENST00000384511 114 ntBASIC5.19□□□□□ -1.58
CDC42BPAQ5VT25 BX842559.1-201ENST00000419615 532 ntBASIC5.19□□□□□ -1.58
CDC42BPAQ5VT25 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC5.19□□□□□ -1.58
CDC42BPAQ5VT25 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.19□□□□□ -1.58
CDC42BPAQ5VT25 HMGB1P19-201ENST00000517578 577 ntBASIC5.19□□□□□ -1.58
CDC42BPAQ5VT25 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC5.19□□□□□ -1.58
CDC42BPAQ5VT25 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.19□□□□□ -1.58
CDC42BPAQ5VT25 AC023389.2-201ENST00000580031 955 ntBASIC5.19□□□□□ -1.58
CDC42BPAQ5VT25 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.19□□□□□ -1.58
CDC42BPAQ5VT25 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5.19□□□□□ -1.58
CDC42BPAQ5VT25 MIR486-1-201ENST00000612171 68 ntBASIC5.19□□□□□ -1.58
CDC42BPAQ5VT25 AC244517.3-201ENST00000616254 1235 ntBASIC5.19□□□□□ -1.58
CDC42BPAQ5VT25 BTBD10P1-201ENST00000549824 1352 ntBASIC5.19□□□□□ -1.58
CDC42BPAQ5VT25 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.19□□□□□ -1.58
CDC42BPAQ5VT25 TNPO1P3-201ENST00000436471 2662 ntBASIC5.19□□□□□ -1.58
CDC42BPAQ5VT25 AC119744.1-201ENST00000454746 1715 ntBASIC5.18□□□□□ -1.58
CDC42BPAQ5VT25 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDC42BPAQ5VT25 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDC42BPAQ5VT25 RPL23AP82-202ENST00000427528 469 ntBASIC5.18□□□□□ -1.58
CDC42BPAQ5VT25 BX119904.1-201ENST00000432026 348 ntBASIC5.18□□□□□ -1.58
CDC42BPAQ5VT25 AC010469.1-201ENST00000463864 576 ntBASIC5.18□□□□□ -1.58
CDC42BPAQ5VT25 CENPBD1P1-201ENST00000464061 469 ntBASIC5.18□□□□□ -1.58
CDC42BPAQ5VT25 AC024224.1-201ENST00000538284 609 ntBASIC5.18□□□□□ -1.58
CDC42BPAQ5VT25 DPRXP4-201ENST00000578053 568 ntBASIC5.18□□□□□ -1.58
CDC42BPAQ5VT25 AL139395.1-201ENST00000603662 160 ntBASIC5.18□□□□□ -1.58
CDC42BPAQ5VT25 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC5.18□□□□□ -1.58
CDC42BPAQ5VT25 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDC42BPAQ5VT25 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.18□□□□□ -1.58
CDC42BPAQ5VT25 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC5.18□□□□□ -1.58
CDC42BPAQ5VT25 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDC42BPAQ5VT25 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CDC42BPAQ5VT25 OTUD4P1-201ENST00000237841 3067 ntBASIC5.18□□□□□ -1.58
CDC42BPAQ5VT25 NMD3P1-201ENST00000439704 1488 ntBASIC5.18□□□□□ -1.58
CDC42BPAQ5VT25 Z83843.1-201ENST00000604070 3685 ntBASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 U3.26-201ENST00000391236 204 ntBASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 AC236972.1-201ENST00000433225 199 ntBASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 AL121594.4-201ENST00000556211 1196 ntBASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 PCA3_2.1-201ENST00000612507 409 ntBASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 MIR6852-201ENST00000621699 66 ntBASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 SNORA54-201ENST00000384281 123 ntBASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 Z99755.1-201ENST00000414048 380 ntBASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 IFNNP1-201ENST00000429219 553 ntBASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 AL353705.1-201ENST00000433468 480 ntBASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 ANP32BP2-201ENST00000454525 545 ntBASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 AC018442.3-201ENST00000523025 183 ntBASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 AC005858.4-201ENST00000623191 700 ntBASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 HSPA8P19-201ENST00000505359 1517 ntBASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CDC42BPAQ5VT25 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDC42BPAQ5VT25 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
CDC42BPAQ5VT25 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CDC42BPAQ5VT25 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
CDC42BPAQ5VT25 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CDC42BPAQ5VT25 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms