Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.24□□□□□ -1.57
CALD1Q05682 HMGB1P16-201ENST00000447155 540 ntBASIC5.24□□□□□ -1.57
CALD1Q05682 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC5.24□□□□□ -1.57
CALD1Q05682 AL162151.2-201ENST00000448875 158 ntBASIC5.24□□□□□ -1.57
CALD1Q05682 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.24□□□□□ -1.57
CALD1Q05682 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.24□□□□□ -1.57
CALD1Q05682 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.24□□□□□ -1.57
CALD1Q05682 TPT1P3-201ENST00000492841 512 ntBASIC5.24□□□□□ -1.57
CALD1Q05682 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.24□□□□□ -1.57
CALD1Q05682 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.24□□□□□ -1.57
CALD1Q05682 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.24□□□□□ -1.57
CALD1Q05682 AC108064.1-201ENST00000513791 460 ntBASIC5.24□□□□□ -1.57
CALD1Q05682 RNU6-1102P-201ENST00000516149 96 ntBASIC5.24□□□□□ -1.57
CALD1Q05682 IGHV3-32-201ENST00000519182 355 ntBASIC5.24□□□□□ -1.57
CALD1Q05682 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.24□□□□□ -1.57
CALD1Q05682 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.24□□□□□ -1.57
CALD1Q05682 CBX3P5-201ENST00000552017 521 ntBASIC5.24□□□□□ -1.57
CALD1Q05682 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.24□□□□□ -1.57
CALD1Q05682 AC116447.1-201ENST00000613153 453 ntBASIC5.24□□□□□ -1.57
CALD1Q05682 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.24□□□□□ -1.57
CALD1Q05682 AL731566.2-201ENST00000618971 317 ntBASIC5.24□□□□□ -1.57
CALD1Q05682 AC068724.3-201ENST00000625906 87 ntBASIC5.24□□□□□ -1.57
CALD1Q05682 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.24□□□□□ -1.57
CALD1Q05682 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.24□□□□□ -1.57
CALD1Q05682 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CALD1Q05682 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CALD1Q05682 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.24□□□□□ -1.57
CALD1Q05682 GTF2H2B-203ENST00000508065 1432 ntBASIC5.23□□□□□ -1.57
CALD1Q05682 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CALD1Q05682 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CALD1Q05682 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CALD1Q05682 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CALD1Q05682 RNA5SP239-201ENST00000410218 129 ntBASIC5.23□□□□□ -1.57
CALD1Q05682 RN7SKP263-201ENST00000411194 309 ntBASIC5.23□□□□□ -1.57
CALD1Q05682 MTND4P11-201ENST00000417020 1058 ntBASIC5.23□□□□□ -1.57
CALD1Q05682 LINC01347-201ENST00000417964 355 ntBASIC5.23□□□□□ -1.57
CALD1Q05682 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.23□□□□□ -1.57
CALD1Q05682 HIGD1AP4-201ENST00000430194 280 ntBASIC5.23□□□□□ -1.57
CALD1Q05682 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.23□□□□□ -1.57
CALD1Q05682 ARL4AP4-201ENST00000434170 518 ntBASIC5.23□□□□□ -1.57
CALD1Q05682 ELOCP3-201ENST00000439303 348 ntBASIC5.23□□□□□ -1.57
CALD1Q05682 RPL21P89-201ENST00000444021 467 ntBASIC5.23□□□□□ -1.57
CALD1Q05682 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.23□□□□□ -1.57
CALD1Q05682 RPL23AP73-201ENST00000492507 471 ntBASIC5.23□□□□□ -1.57
CALD1Q05682 AC025554.1-201ENST00000505641 188 ntBASIC5.23□□□□□ -1.57
CALD1Q05682 IGKV2D-23-201ENST00000518179 286 ntBASIC5.23□□□□□ -1.57
CALD1Q05682 OR8R1P-201ENST00000543943 764 ntBASIC5.23□□□□□ -1.57
CALD1Q05682 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.23□□□□□ -1.57
CALD1Q05682 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.23□□□□□ -1.57
CALD1Q05682 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.23□□□□□ -1.57
CALD1Q05682 AC025918.2-201ENST00000558683 763 ntBASIC5.23□□□□□ -1.57
CALD1Q05682 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.23□□□□□ -1.57
CALD1Q05682 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.23□□□□□ -1.57
CALD1Q05682 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CALD1Q05682 ZNF92P2-201ENST00000600543 1059 ntBASIC5.23□□□□□ -1.57
CALD1Q05682 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.23□□□□□ -1.57
CALD1Q05682 AC068831.8-201ENST00000620171 435 ntBASIC5.23□□□□□ -1.57
CALD1Q05682 AL139089.1-201ENST00000620372 975 ntBASIC5.23□□□□□ -1.57
CALD1Q05682 AC103858.2-201ENST00000621471 543 ntBASIC5.23□□□□□ -1.57
CALD1Q05682 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.23□□□□□ -1.57
CALD1Q05682 AC024341.1-201ENST00000526444 1552 ntBASIC5.23□□□□□ -1.57
CALD1Q05682 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CALD1Q05682 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CALD1Q05682 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CALD1Q05682 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CALD1Q05682 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CALD1Q05682 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
CALD1Q05682 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CALD1Q05682 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CALD1Q05682 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CALD1Q05682 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CALD1Q05682 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CALD1Q05682 HMGB1P10-201ENST00000395823 563 ntBASIC5.22□□□□□ -1.57
CALD1Q05682 RNU6-628P-201ENST00000410675 107 ntBASIC5.22□□□□□ -1.57
CALD1Q05682 RNU4-6P-201ENST00000410804 122 ntBASIC5.22□□□□□ -1.57
CALD1Q05682 MTCO1P54-201ENST00000430139 712 ntBASIC5.22□□□□□ -1.57
CALD1Q05682 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.22□□□□□ -1.57
CALD1Q05682 CBX1P4-201ENST00000439415 457 ntBASIC5.22□□□□□ -1.57
CALD1Q05682 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.22□□□□□ -1.57
CALD1Q05682 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.22□□□□□ -1.57
CALD1Q05682 AC069540.1-201ENST00000446320 988 ntBASIC5.22□□□□□ -1.57
CALD1Q05682 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.22□□□□□ -1.57
CALD1Q05682 AL645939.1-201ENST00000453429 797 ntBASIC5.22□□□□□ -1.57
CALD1Q05682 SNORA76.2-201ENST00000517095 137 ntBASIC5.22□□□□□ -1.57
CALD1Q05682 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.22□□□□□ -1.57
CALD1Q05682 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.22□□□□□ -1.57
CALD1Q05682 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.22□□□□□ -1.57
CALD1Q05682 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.22□□□□□ -1.57
CALD1Q05682 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.22□□□□□ -1.57
CALD1Q05682 AC009101.1-201ENST00000568135 242 ntBASIC5.22□□□□□ -1.57
CALD1Q05682 AGGF1P6-201ENST00000569213 976 ntBASIC5.22□□□□□ -1.57
CALD1Q05682 HNRNPCP4-201ENST00000571636 900 ntBASIC5.22□□□□□ -1.57
CALD1Q05682 VN1R79P-201ENST00000593540 513 ntBASIC5.22□□□□□ -1.57
CALD1Q05682 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC5.22□□□□□ -1.57
CALD1Q05682 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.22□□□□□ -1.57
CALD1Q05682 AC092474.3-201ENST00000603022 568 ntBASIC5.22□□□□□ -1.57
CALD1Q05682 MIR7973-1-201ENST00000614683 76 ntBASIC5.22□□□□□ -1.57
CALD1Q05682 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
CALD1Q05682 AC116563.2-201ENST00000624751 535 ntBASIC5.22□□□□□ -1.57
CALD1Q05682 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 148.7 ms