Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC235565.1-201ENST00000456962 1325 ntBASIC4.41□□□□□ -1.7
SOX2P48431 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SOX2P48431 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SOX2P48431 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SOX2P48431 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.41□□□□□ -1.7
SOX2P48431 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.4□□□□□ -1.7
SOX2P48431 ZNF37BP-203ENST00000452306 1352 ntBASIC4.4□□□□□ -1.7
SOX2P48431 AC090017.1-201ENST00000548612 1779 ntBASIC4.4□□□□□ -1.7
SOX2P48431 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SOX2P48431 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SOX2P48431 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.4□□□□□ -1.7
SOX2P48431 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
SOX2P48431 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
SOX2P48431 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.71
SOX2P48431 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SOX2P48431 RN7SKP113-201ENST00000363891 295 ntBASIC4.4□□□□□ -1.71
SOX2P48431 RNU6-660P-201ENST00000364566 109 ntBASIC4.4□□□□□ -1.71
SOX2P48431 RN7SKP124-201ENST00000364730 341 ntBASIC4.4□□□□□ -1.71
SOX2P48431 RNA5SP88-201ENST00000365560 109 ntBASIC4.4□□□□□ -1.71
SOX2P48431 UBBP2-201ENST00000376781 231 ntBASIC4.4□□□□□ -1.71
SOX2P48431 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.4□□□□□ -1.71
SOX2P48431 MIR1271-201ENST00000408537 86 ntBASIC4.4□□□□□ -1.71
SOX2P48431 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.4□□□□□ -1.71
SOX2P48431 RPL6P29-201ENST00000414863 865 ntBASIC4.4□□□□□ -1.71
SOX2P48431 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.4□□□□□ -1.71
SOX2P48431 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.4□□□□□ -1.71
SOX2P48431 CENPIP1-201ENST00000425713 902 ntBASIC4.4□□□□□ -1.71
SOX2P48431 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.4□□□□□ -1.71
SOX2P48431 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.4□□□□□ -1.71
SOX2P48431 UBE2FP3-201ENST00000436366 524 ntBASIC4.4□□□□□ -1.71
SOX2P48431 MTND1P34-201ENST00000438556 671 ntBASIC4.4□□□□□ -1.71
SOX2P48431 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.4□□□□□ -1.71
SOX2P48431 MTND6P18-201ENST00000439477 513 ntBASIC4.4□□□□□ -1.71
SOX2P48431 ELOCP10-201ENST00000440624 327 ntBASIC4.4□□□□□ -1.71
SOX2P48431 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.4□□□□□ -1.71
SOX2P48431 OR52J1P-201ENST00000450596 932 ntBASIC4.4□□□□□ -1.71
SOX2P48431 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.4□□□□□ -1.71
SOX2P48431 USP9YP10-201ENST00000454868 628 ntBASIC4.4□□□□□ -1.71
SOX2P48431 AL591473.1-201ENST00000464297 313 ntBASIC4.4□□□□□ -1.71
SOX2P48431 NDUFA5P5-201ENST00000468361 342 ntBASIC4.4□□□□□ -1.71
SOX2P48431 HMGN2P25-201ENST00000486956 268 ntBASIC4.4□□□□□ -1.71
SOX2P48431 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.4□□□□□ -1.71
SOX2P48431 USP9YP5-201ENST00000511770 630 ntBASIC4.4□□□□□ -1.71
SOX2P48431 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.4□□□□□ -1.71
SOX2P48431 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.4□□□□□ -1.71
SOX2P48431 AC008802.1-201ENST00000519121 791 ntBASIC4.4□□□□□ -1.71
SOX2P48431 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.4□□□□□ -1.71
SOX2P48431 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.4□□□□□ -1.71
SOX2P48431 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SOX2P48431 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.4□□□□□ -1.71
SOX2P48431 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.4□□□□□ -1.71
SOX2P48431 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.4□□□□□ -1.71
SOX2P48431 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.4□□□□□ -1.71
SOX2P48431 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.4□□□□□ -1.71
SOX2P48431 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.4□□□□□ -1.71
SOX2P48431 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.4□□□□□ -1.71
SOX2P48431 DEFB131E-202ENST00000602581 683 ntBASIC4.4□□□□□ -1.71
SOX2P48431 ELOCP34-201ENST00000604436 327 ntBASIC4.4□□□□□ -1.71
SOX2P48431 AP005432.2-201ENST00000608162 586 ntBASIC4.4□□□□□ -1.71
SOX2P48431 AC104073.3-201ENST00000610942 955 ntBASIC4.4□□□□□ -1.71
SOX2P48431 RN7SL787P-201ENST00000613000 284 ntBASIC4.4□□□□□ -1.71
SOX2P48431 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.4□□□□□ -1.71
SOX2P48431 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SOX2P48431 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.4□□□□□ -1.71
SOX2P48431 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SOX2P48431 AL590240.3-201ENST00000621416 943 ntBASIC4.4□□□□□ -1.71
SOX2P48431 AL356266.1-201ENST00000623311 483 ntBASIC4.4□□□□□ -1.71
SOX2P48431 AL691477.1-201ENST00000624398 162 ntBASIC4.4□□□□□ -1.71
SOX2P48431 AC092184.1-201ENST00000625042 715 ntBASIC4.4□□□□□ -1.71
SOX2P48431 LINC01739-205ENST00000641890 573 ntBASIC4.4□□□□□ -1.71
SOX2P48431 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
SOX2P48431 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SOX2P48431 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.4□□□□□ -1.71
SOX2P48431 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.4□□□□□ -1.71
SOX2P48431 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SOX2P48431 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.4□□□□□ -1.71
SOX2P48431 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.39□□□□□ -1.71
SOX2P48431 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SOX2P48431 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.39□□□□□ -1.71
SOX2P48431 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
SOX2P48431 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SOX2P48431 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SOX2P48431 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SOX2P48431 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SOX2P48431 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SOX2P48431 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SOX2P48431 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SOX2P48431 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SOX2P48431 AL450338.1-201ENST00000407987 512 ntBASIC4.39□□□□□ -1.71
SOX2P48431 Y_RNA.599-201ENST00000410489 109 ntBASIC4.39□□□□□ -1.71
SOX2P48431 SDHDP6-201ENST00000414693 480 ntBASIC4.39□□□□□ -1.71
SOX2P48431 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.39□□□□□ -1.71
SOX2P48431 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.39□□□□□ -1.71
SOX2P48431 AC008280.1-201ENST00000418851 412 ntBASIC4.39□□□□□ -1.71
SOX2P48431 AL590609.2-201ENST00000421430 368 ntBASIC4.39□□□□□ -1.71
SOX2P48431 NIPA2P1-201ENST00000426223 976 ntBASIC4.39□□□□□ -1.71
SOX2P48431 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.39□□□□□ -1.71
SOX2P48431 BX323845.1-201ENST00000432417 179 ntBASIC4.39□□□□□ -1.71
SOX2P48431 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.39□□□□□ -1.71
SOX2P48431 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms