Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AL392112.1-201ENST00000605115 829 ntBASIC4.17□□□□□ -1.74
SLC6A12P48065 AL031666.3-201ENST00000609320 1006 ntBASIC4.17□□□□□ -1.74
SLC6A12P48065 AC093673.2-201ENST00000609674 331 ntBASIC4.17□□□□□ -1.74
SLC6A12P48065 AC024595.1-201ENST00000623088 387 ntBASIC4.17□□□□□ -1.74
SLC6A12P48065 AC068787.1-201ENST00000623908 691 ntBASIC4.17□□□□□ -1.74
SLC6A12P48065 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.17□□□□□ -1.74
SLC6A12P48065 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.17□□□□□ -1.74
SLC6A12P48065 OR6C71P-202ENST00000641886 1107 ntBASIC4.17□□□□□ -1.74
SLC6A12P48065 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SLC6A12P48065 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SLC6A12P48065 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SLC6A12P48065 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SLC6A12P48065 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SLC6A12P48065 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.17□□□□□ -1.74
SLC6A12P48065 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SLC6A12P48065 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
SLC6A12P48065 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
SLC6A12P48065 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SLC6A12P48065 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SLC6A12P48065 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.16□□□□□ -1.74
SLC6A12P48065 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SLC6A12P48065 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SLC6A12P48065 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SLC6A12P48065 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SLC6A12P48065 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SLC6A12P48065 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SLC6A12P48065 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
SLC6A12P48065 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SLC6A12P48065 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
SLC6A12P48065 RAB28P1-201ENST00000411517 641 ntBASIC4.16□□□□□ -1.74
SLC6A12P48065 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC6A12P48065 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC6A12P48065 SSR1P2-201ENST00000415208 787 ntBASIC4.16□□□□□ -1.74
SLC6A12P48065 AC008173.1-201ENST00000418901 264 ntBASIC4.16□□□□□ -1.74
SLC6A12P48065 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC6A12P48065 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC6A12P48065 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.16□□□□□ -1.74
SLC6A12P48065 IPMKP1-201ENST00000425988 855 ntBASIC4.16□□□□□ -1.74
SLC6A12P48065 AL157831.1-201ENST00000426134 473 ntBASIC4.16□□□□□ -1.74
SLC6A12P48065 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.16□□□□□ -1.74
SLC6A12P48065 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.16□□□□□ -1.74
SLC6A12P48065 HLA-N-201ENST00000437516 135 ntBASIC4.16□□□□□ -1.74
SLC6A12P48065 MTCO1P53-201ENST00000441633 699 ntBASIC4.16□□□□□ -1.74
SLC6A12P48065 AL512326.1-201ENST00000443050 721 ntBASIC4.16□□□□□ -1.74
SLC6A12P48065 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.16□□□□□ -1.74
SLC6A12P48065 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC6A12P48065 BNIP3P41-201ENST00000503774 571 ntBASIC4.16□□□□□ -1.74
SLC6A12P48065 AC098862.1-201ENST00000504991 413 ntBASIC4.16□□□□□ -1.74
SLC6A12P48065 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.16□□□□□ -1.74
SLC6A12P48065 AC025674.1-201ENST00000507074 324 ntBASIC4.16□□□□□ -1.74
SLC6A12P48065 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.16□□□□□ -1.74
SLC6A12P48065 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.16□□□□□ -1.74
SLC6A12P48065 AC006499.6-201ENST00000511169 607 ntBASIC4.16□□□□□ -1.74
SLC6A12P48065 AC008494.2-201ENST00000514544 370 ntBASIC4.16□□□□□ -1.74
SLC6A12P48065 HMGB1P19-201ENST00000517578 577 ntBASIC4.16□□□□□ -1.74
SLC6A12P48065 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC6A12P48065 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SLC6A12P48065 AC083923.1-201ENST00000523708 376 ntBASIC4.16□□□□□ -1.74
SLC6A12P48065 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SLC6A12P48065 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.16□□□□□ -1.74
SLC6A12P48065 AC139103.1-201ENST00000534696 1030 ntBASIC4.16□□□□□ -1.74
SLC6A12P48065 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.16□□□□□ -1.74
SLC6A12P48065 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC6A12P48065 TRAV8-5-201ENST00000537369 341 ntBASIC4.16□□□□□ -1.74
SLC6A12P48065 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.16□□□□□ -1.74
SLC6A12P48065 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.16□□□□□ -1.74
SLC6A12P48065 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC6A12P48065 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC6A12P48065 AC010735.1-201ENST00000567305 1026 ntBASIC4.16□□□□□ -1.74
SLC6A12P48065 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC6A12P48065 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.16□□□□□ -1.74
SLC6A12P48065 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.16□□□□□ -1.74
SLC6A12P48065 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC6A12P48065 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.16□□□□□ -1.74
SLC6A12P48065 AL035461.2-201ENST00000619201 524 ntBASIC4.16□□□□□ -1.74
SLC6A12P48065 MIR6810-201ENST00000622701 70 ntBASIC4.16□□□□□ -1.74
SLC6A12P48065 AC008013.2-202ENST00000637965 364 ntBASIC4.16□□□□□ -1.74
SLC6A12P48065 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
SLC6A12P48065 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.16□□□□□ -1.74
SLC6A12P48065 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SLC6A12P48065 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SLC6A12P48065 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SLC6A12P48065 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.16□□□□□ -1.74
SLC6A12P48065 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
SLC6A12P48065 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SLC6A12P48065 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SLC6A12P48065 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.15□□□□□ -1.74
SLC6A12P48065 AC119744.1-201ENST00000454746 1715 ntBASIC4.15□□□□□ -1.74
SLC6A12P48065 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SLC6A12P48065 AC026951.1-201ENST00000559530 2459 ntBASIC4.15□□□□□ -1.74
SLC6A12P48065 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
SLC6A12P48065 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.74
SLC6A12P48065 MFSD8-220ENST00000641243 1422 ntBASIC4.15□□□□□ -1.74
SLC6A12P48065 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
SLC6A12P48065 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.74
SLC6A12P48065 ENSAP3-201ENST00000312710 333 ntBASIC4.15□□□□□ -1.75
SLC6A12P48065 RNA5SP391-201ENST00000363456 119 ntBASIC4.15□□□□□ -1.75
SLC6A12P48065 RNA5SP447-201ENST00000363749 119 ntBASIC4.15□□□□□ -1.75
SLC6A12P48065 RNA5SP27-201ENST00000363839 119 ntBASIC4.15□□□□□ -1.75
SLC6A12P48065 AP002784.2-201ENST00000397300 549 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms