Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL6A2P12110 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.44□□□□□ -1.54
COL6A2P12110 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL6A2P12110 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
COL6A2P12110 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
COL6A2P12110 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.43□□□□□ -1.54
COL6A2P12110 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.43□□□□□ -1.54
COL6A2P12110 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL6A2P12110 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
COL6A2P12110 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
COL6A2P12110 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL6A2P12110 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.43□□□□□ -1.54
COL6A2P12110 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL6A2P12110 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.43□□□□□ -1.54
COL6A2P12110 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL6A2P12110 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL6A2P12110 RPS3AP2-201ENST00000407190 754 ntBASIC5.43□□□□□ -1.54
COL6A2P12110 RNU2-28P-201ENST00000410457 189 ntBASIC5.43□□□□□ -1.54
COL6A2P12110 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.43□□□□□ -1.54
COL6A2P12110 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.43□□□□□ -1.54
COL6A2P12110 AC009480.2-201ENST00000422916 432 ntBASIC5.43□□□□□ -1.54
COL6A2P12110 AC007742.1-201ENST00000425789 329 ntBASIC5.43□□□□□ -1.54
COL6A2P12110 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.43□□□□□ -1.54
COL6A2P12110 BX890604.2-201ENST00000427883 474 ntBASIC5.43□□□□□ -1.54
COL6A2P12110 BX323845.3-201ENST00000428215 527 ntBASIC5.43□□□□□ -1.54
COL6A2P12110 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.43□□□□□ -1.54
COL6A2P12110 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.43□□□□□ -1.54
COL6A2P12110 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.43□□□□□ -1.54
COL6A2P12110 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.43□□□□□ -1.54
COL6A2P12110 CLUHP1-201ENST00000435012 1190 ntBASIC5.43□□□□□ -1.54
COL6A2P12110 ELOCP26-201ENST00000436067 329 ntBASIC5.43□□□□□ -1.54
COL6A2P12110 AL450263.2-201ENST00000439400 589 ntBASIC5.43□□□□□ -1.54
COL6A2P12110 PGBD4P3-201ENST00000440731 581 ntBASIC5.43□□□□□ -1.54
COL6A2P12110 AC112653.1-201ENST00000443851 386 ntBASIC5.43□□□□□ -1.54
COL6A2P12110 AC005297.1-201ENST00000444765 862 ntBASIC5.43□□□□□ -1.54
COL6A2P12110 MTCO1P27-201ENST00000448269 226 ntBASIC5.43□□□□□ -1.54
COL6A2P12110 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC5.43□□□□□ -1.54
COL6A2P12110 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC5.43□□□□□ -1.54
COL6A2P12110 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.43□□□□□ -1.54
COL6A2P12110 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.43□□□□□ -1.54
COL6A2P12110 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC5.43□□□□□ -1.54
COL6A2P12110 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC5.43□□□□□ -1.54
COL6A2P12110 KCTD9P2-201ENST00000512203 1013 ntBASIC5.43□□□□□ -1.54
COL6A2P12110 EIF3KP3-201ENST00000514461 639 ntBASIC5.43□□□□□ -1.54
COL6A2P12110 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
COL6A2P12110 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.43□□□□□ -1.54
COL6A2P12110 AP000790.1-201ENST00000528891 737 ntBASIC5.43□□□□□ -1.54
COL6A2P12110 OR4A12P-201ENST00000530847 918 ntBASIC5.43□□□□□ -1.54
COL6A2P12110 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.43□□□□□ -1.54
COL6A2P12110 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC5.43□□□□□ -1.54
COL6A2P12110 NMNAT1P1-201ENST00000554095 876 ntBASIC5.43□□□□□ -1.54
COL6A2P12110 IGBP1P1-201ENST00000554337 1009 ntBASIC5.43□□□□□ -1.54
COL6A2P12110 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC5.43□□□□□ -1.54
COL6A2P12110 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.43□□□□□ -1.54
COL6A2P12110 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.43□□□□□ -1.54
COL6A2P12110 AL161729.4-201ENST00000604650 476 ntBASIC5.43□□□□□ -1.54
COL6A2P12110 AC072046.2-201ENST00000618366 268 ntBASIC5.43□□□□□ -1.54
COL6A2P12110 AL157786.1-207ENST00000627771 695 ntBASIC5.43□□□□□ -1.54
COL6A2P12110 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
COL6A2P12110 AC092162.3-201ENST00000624511 1624 ntBASIC5.43□□□□□ -1.54
COL6A2P12110 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.43□□□□□ -1.54
COL6A2P12110 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL6A2P12110 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL6A2P12110 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.43□□□□□ -1.54
COL6A2P12110 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.43□□□□□ -1.54
COL6A2P12110 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL6A2P12110 AC073544.1-201ENST00000600110 1595 ntBASIC5.42□□□□□ -1.54
COL6A2P12110 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL6A2P12110 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.42□□□□□ -1.54
COL6A2P12110 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
COL6A2P12110 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.42□□□□□ -1.54
COL6A2P12110 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL6A2P12110 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
COL6A2P12110 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL6A2P12110 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.42□□□□□ -1.54
COL6A2P12110 Y_RNA.256-201ENST00000364594 104 ntBASIC5.42□□□□□ -1.54
COL6A2P12110 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL6A2P12110 OR1L6-202ENST00000373684 1044 ntBASIC5.42□□□□□ -1.54
COL6A2P12110 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
COL6A2P12110 SNORD115-47-201ENST00000391226 86 ntBASIC5.42□□□□□ -1.54
COL6A2P12110 GAPDHP42-201ENST00000406848 981 ntBASIC5.42□□□□□ -1.54
COL6A2P12110 MIR1277-201ENST00000408536 78 ntBASIC5.42□□□□□ -1.54
COL6A2P12110 USP9YP6-201ENST00000413550 854 ntBASIC5.42□□□□□ -1.54
COL6A2P12110 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL6A2P12110 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC5.42□□□□□ -1.54
COL6A2P12110 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.42□□□□□ -1.54
COL6A2P12110 SDCBPP2-201ENST00000424643 885 ntBASIC5.42□□□□□ -1.54
COL6A2P12110 ZNF863P-201ENST00000426746 417 ntBASIC5.42□□□□□ -1.54
COL6A2P12110 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
COL6A2P12110 RPL19P16-201ENST00000433839 588 ntBASIC5.42□□□□□ -1.54
COL6A2P12110 PPIAP13-201ENST00000434706 478 ntBASIC5.42□□□□□ -1.54
COL6A2P12110 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.42□□□□□ -1.54
COL6A2P12110 RPL7L1P1-201ENST00000448259 785 ntBASIC5.42□□□□□ -1.54
COL6A2P12110 RPL39P6-201ENST00000448289 150 ntBASIC5.42□□□□□ -1.54
COL6A2P12110 USP9YP34-201ENST00000453983 808 ntBASIC5.42□□□□□ -1.54
COL6A2P12110 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC5.42□□□□□ -1.54
COL6A2P12110 ACA64.1-201ENST00000459171 127 ntBASIC5.42□□□□□ -1.54
COL6A2P12110 RPS23P6-201ENST00000466136 431 ntBASIC5.42□□□□□ -1.54
COL6A2P12110 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.42□□□□□ -1.54
COL6A2P12110 AC005912.1-201ENST00000495392 255 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 213.9 ms