Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SPTA1P02549 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SPTA1P02549 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.28□□□□□ -1.88
SPTA1P02549 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.28□□□□□ -1.88
SPTA1P02549 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SPTA1P02549 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
SPTA1P02549 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.89
SPTA1P02549 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
SPTA1P02549 RPL31P50-201ENST00000471002 296 ntBASIC3.28□□□□□ -1.89
SPTA1P02549 HMGB1P21-201ENST00000502313 581 ntBASIC3.28□□□□□ -1.89
SPTA1P02549 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.89
SPTA1P02549 RAC1P2-201ENST00000511164 579 ntBASIC3.28□□□□□ -1.89
SPTA1P02549 AC092747.2-201ENST00000545069 983 ntBASIC3.28□□□□□ -1.89
SPTA1P02549 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.28□□□□□ -1.89
SPTA1P02549 AC002069.2-201ENST00000603580 883 ntBASIC3.28□□□□□ -1.89
SPTA1P02549 MIR8069-1-201ENST00000616627 86 ntBASIC3.28□□□□□ -1.89
SPTA1P02549 MIR8069-2-201ENST00000621412 86 ntBASIC3.28□□□□□ -1.89
SPTA1P02549 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
SPTA1P02549 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SPTA1P02549 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
SPTA1P02549 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SPTA1P02549 AC067945.1-201ENST00000342609 618 ntBASIC3.27□□□□□ -1.89
SPTA1P02549 RNA5SP197-201ENST00000363357 119 ntBASIC3.27□□□□□ -1.89
SPTA1P02549 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SPTA1P02549 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.27□□□□□ -1.89
SPTA1P02549 RPL23AP89-201ENST00000439324 255 ntBASIC3.27□□□□□ -1.89
SPTA1P02549 AC073522.1-201ENST00000483312 377 ntBASIC3.27□□□□□ -1.89
SPTA1P02549 AC080014.1-201ENST00000496877 1201 ntBASIC3.27□□□□□ -1.89
SPTA1P02549 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.27□□□□□ -1.89
SPTA1P02549 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.27□□□□□ -1.89
SPTA1P02549 CKS1BP3-201ENST00000600888 237 ntBASIC3.27□□□□□ -1.89
SPTA1P02549 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SPTA1P02549 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
SPTA1P02549 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SPTA1P02549 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SPTA1P02549 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SPTA1P02549 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SPTA1P02549 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SPTA1P02549 MIR195-201ENST00000385194 87 ntBASIC3.27□□□□□ -1.89
SPTA1P02549 SNORD17-201ENST00000390930 237 ntBASIC3.27□□□□□ -1.89
SPTA1P02549 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.27□□□□□ -1.89
SPTA1P02549 BX842559.1-201ENST00000419615 532 ntBASIC3.27□□□□□ -1.89
SPTA1P02549 AL139281.1-201ENST00000422120 335 ntBASIC3.27□□□□□ -1.89
SPTA1P02549 Z93242.1-201ENST00000427102 353 ntBASIC3.27□□□□□ -1.89
SPTA1P02549 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.27□□□□□ -1.89
SPTA1P02549 AC099063.2-201ENST00000446360 662 ntBASIC3.27□□□□□ -1.89
SPTA1P02549 PPP1R11P1-201ENST00000486095 376 ntBASIC3.27□□□□□ -1.89
SPTA1P02549 NPM1P28-201ENST00000492269 840 ntBASIC3.27□□□□□ -1.89
SPTA1P02549 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.27□□□□□ -1.89
SPTA1P02549 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.27□□□□□ -1.89
SPTA1P02549 NRBF2P5-201ENST00000603087 788 ntBASIC3.27□□□□□ -1.89
SPTA1P02549 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.27□□□□□ -1.89
SPTA1P02549 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SPTA1P02549 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.26□□□□□ -1.89
SPTA1P02549 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SPTA1P02549 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SPTA1P02549 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SPTA1P02549 AC234772.1-201ENST00000377927 937 ntBASIC3.26□□□□□ -1.89
SPTA1P02549 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.26□□□□□ -1.89
SPTA1P02549 TOMM20P4-201ENST00000427861 435 ntBASIC3.26□□□□□ -1.89
SPTA1P02549 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.26□□□□□ -1.89
SPTA1P02549 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SPTA1P02549 AL359219.2-201ENST00000555184 348 ntBASIC3.26□□□□□ -1.89
SPTA1P02549 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC3.26□□□□□ -1.89
SPTA1P02549 SNORA62.6-201ENST00000606322 83 ntBASIC3.26□□□□□ -1.89
SPTA1P02549 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.26□□□□□ -1.89
SPTA1P02549 U4.6-201ENST00000621618 127 ntBASIC3.26□□□□□ -1.89
SPTA1P02549 AP003355.3-201ENST00000623465 114 ntBASIC3.26□□□□□ -1.89
SPTA1P02549 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
SPTA1P02549 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.26□□□□□ -1.89
SPTA1P02549 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC3.26□□□□□ -1.89
SPTA1P02549 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SPTA1P02549 ZNF807-201ENST00000328088 1707 ntBASIC3.26□□□□□ -1.89
SPTA1P02549 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC3.26□□□□□ -1.89
SPTA1P02549 AC009313.2-201ENST00000417893 1941 ntBASIC3.26□□□□□ -1.89
SPTA1P02549 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
SPTA1P02549 RNA5SP235-201ENST00000365411 114 ntBASIC3.25□□□□□ -1.89
SPTA1P02549 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SPTA1P02549 MTHFD2P2-201ENST00000407725 247 ntBASIC3.25□□□□□ -1.89
SPTA1P02549 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.25□□□□□ -1.89
SPTA1P02549 OR5AW1P-201ENST00000426334 1006 ntBASIC3.25□□□□□ -1.89
SPTA1P02549 NPM1P48-201ENST00000436002 853 ntBASIC3.25□□□□□ -1.89
SPTA1P02549 AC097262.1-201ENST00000452559 548 ntBASIC3.25□□□□□ -1.89
SPTA1P02549 PSMC1P13-201ENST00000458195 985 ntBASIC3.25□□□□□ -1.89
SPTA1P02549 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
SPTA1P02549 OR2A20P-203ENST00000498397 1268 ntBASIC3.25□□□□□ -1.89
SPTA1P02549 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.25□□□□□ -1.89
SPTA1P02549 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.25□□□□□ -1.89
SPTA1P02549 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.25□□□□□ -1.89
SPTA1P02549 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.25□□□□□ -1.89
SPTA1P02549 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.25□□□□□ -1.89
SPTA1P02549 AL512643.1-201ENST00000635735 524 ntBASIC3.25□□□□□ -1.89
SPTA1P02549 ASNSP3-201ENST00000451989 1306 ntBASIC3.25□□□□□ -1.89
SPTA1P02549 HSPA8P19-201ENST00000505359 1517 ntBASIC3.25□□□□□ -1.89
SPTA1P02549 AL136360.1-201ENST00000503377 1900 ntBASIC3.25□□□□□ -1.89
SPTA1P02549 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SPTA1P02549 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
SPTA1P02549 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SPTA1P02549 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.25□□□□□ -1.89
SPTA1P02549 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms