Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AL590240.1-201ENST00000334118 313 ntBASIC4.4□□□□□ -1.71
LDLRP01130 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.4□□□□□ -1.71
LDLRP01130 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.4□□□□□ -1.71
LDLRP01130 RNA5SP447-201ENST00000363749 119 ntBASIC4.4□□□□□ -1.71
LDLRP01130 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
LDLRP01130 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LDLRP01130 AL590290.1-201ENST00000405336 380 ntBASIC4.4□□□□□ -1.71
LDLRP01130 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.4□□□□□ -1.71
LDLRP01130 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.4□□□□□ -1.71
LDLRP01130 LUZP4P1-201ENST00000415420 344 ntBASIC4.4□□□□□ -1.71
LDLRP01130 LIPT1P1-201ENST00000415870 1186 ntBASIC4.4□□□□□ -1.71
LDLRP01130 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.4□□□□□ -1.71
LDLRP01130 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.4□□□□□ -1.71
LDLRP01130 DYNLL1P7-201ENST00000429273 258 ntBASIC4.4□□□□□ -1.71
LDLRP01130 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.4□□□□□ -1.71
LDLRP01130 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.4□□□□□ -1.71
LDLRP01130 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.4□□□□□ -1.71
LDLRP01130 AL050341.1-201ENST00000447743 313 ntBASIC4.4□□□□□ -1.71
LDLRP01130 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.4□□□□□ -1.71
LDLRP01130 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.4□□□□□ -1.71
LDLRP01130 MTND2P28-201ENST00000457540 1044 ntBASIC4.4□□□□□ -1.71
LDLRP01130 AC010618.1-201ENST00000469924 477 ntBASIC4.4□□□□□ -1.71
LDLRP01130 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.4□□□□□ -1.71
LDLRP01130 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.4□□□□□ -1.71
LDLRP01130 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.4□□□□□ -1.71
LDLRP01130 AC112673.1-201ENST00000513168 575 ntBASIC4.4□□□□□ -1.71
LDLRP01130 PRELID3BP4-201ENST00000515476 571 ntBASIC4.4□□□□□ -1.71
LDLRP01130 OR5M2P-201ENST00000529003 936 ntBASIC4.4□□□□□ -1.71
LDLRP01130 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.4□□□□□ -1.71
LDLRP01130 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.4□□□□□ -1.71
LDLRP01130 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.4□□□□□ -1.71
LDLRP01130 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.4□□□□□ -1.71
LDLRP01130 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.4□□□□□ -1.71
LDLRP01130 HNRNPCP4-201ENST00000571636 900 ntBASIC4.4□□□□□ -1.71
LDLRP01130 AP005119.2-201ENST00000579735 1105 ntBASIC4.4□□□□□ -1.71
LDLRP01130 AC023575.1-201ENST00000580510 358 ntBASIC4.4□□□□□ -1.71
LDLRP01130 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LDLRP01130 RPL12P25-202ENST00000598100 674 ntBASIC4.4□□□□□ -1.71
LDLRP01130 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.4□□□□□ -1.71
LDLRP01130 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.4□□□□□ -1.71
LDLRP01130 AL160237.3-201ENST00000604114 1013 ntBASIC4.4□□□□□ -1.71
LDLRP01130 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.4□□□□□ -1.71
LDLRP01130 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LDLRP01130 AL353726.1-201ENST00000614041 1000 ntBASIC4.4□□□□□ -1.71
LDLRP01130 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.4□□□□□ -1.71
LDLRP01130 AC011944.2-201ENST00000624440 683 ntBASIC4.4□□□□□ -1.71
LDLRP01130 AP000676.4-201ENST00000624659 623 ntBASIC4.4□□□□□ -1.71
LDLRP01130 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
LDLRP01130 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
LDLRP01130 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
LDLRP01130 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LDLRP01130 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LDLRP01130 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LDLRP01130 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LDLRP01130 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LDLRP01130 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LDLRP01130 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
LDLRP01130 OR51H2P-202ENST00000641424 3046 ntBASIC4.4□□□□□ -1.71
LDLRP01130 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LDLRP01130 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LDLRP01130 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LDLRP01130 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LDLRP01130 ASNSP1-204ENST00000641977 1664 ntBASIC4.39□□□□□ -1.71
LDLRP01130 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.39□□□□□ -1.71
LDLRP01130 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LDLRP01130 AC087190.4-201ENST00000574616 8334 ntBASIC4.39□□□□□ -1.71
LDLRP01130 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LDLRP01130 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.39□□□□□ -1.71
LDLRP01130 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LDLRP01130 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
LDLRP01130 RNU6-353P-201ENST00000364266 108 ntBASIC4.39□□□□□ -1.71
LDLRP01130 RNU6-304P-201ENST00000364855 107 ntBASIC4.39□□□□□ -1.71
LDLRP01130 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LDLRP01130 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LDLRP01130 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.39□□□□□ -1.71
LDLRP01130 LINC00993-201ENST00000420453 540 ntBASIC4.39□□□□□ -1.71
LDLRP01130 RPL21P43-201ENST00000425440 472 ntBASIC4.39□□□□□ -1.71
LDLRP01130 RPS24P8-201ENST00000431490 402 ntBASIC4.39□□□□□ -1.71
LDLRP01130 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.39□□□□□ -1.71
LDLRP01130 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.39□□□□□ -1.71
LDLRP01130 AL592437.1-201ENST00000443781 492 ntBASIC4.39□□□□□ -1.71
LDLRP01130 AL031313.1-201ENST00000448435 256 ntBASIC4.39□□□□□ -1.71
LDLRP01130 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.39□□□□□ -1.71
LDLRP01130 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.39□□□□□ -1.71
LDLRP01130 AL935212.3-201ENST00000450729 284 ntBASIC4.39□□□□□ -1.71
LDLRP01130 AC010733.1-201ENST00000451515 401 ntBASIC4.39□□□□□ -1.71
LDLRP01130 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.39□□□□□ -1.71
LDLRP01130 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LDLRP01130 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.39□□□□□ -1.71
LDLRP01130 AC244505.3-201ENST00000454598 187 ntBASIC4.39□□□□□ -1.71
LDLRP01130 RPL6P9-201ENST00000466502 859 ntBASIC4.39□□□□□ -1.71
LDLRP01130 AL035404.1-201ENST00000497982 568 ntBASIC4.39□□□□□ -1.71
LDLRP01130 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.39□□□□□ -1.71
LDLRP01130 PPBPP1-201ENST00000510807 373 ntBASIC4.39□□□□□ -1.71
LDLRP01130 AC008837.1-201ENST00000511513 412 ntBASIC4.39□□□□□ -1.71
LDLRP01130 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.39□□□□□ -1.71
LDLRP01130 AC008694.2-201ENST00000517591 306 ntBASIC4.39□□□□□ -1.71
LDLRP01130 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.39□□□□□ -1.71
LDLRP01130 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LDLRP01130 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms