Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC008802.1-201ENST00000519121 791 ntBASIC1.56□□□□□ -2.16
USH2AO75445 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC1.56□□□□□ -2.16
USH2AO75445 AL390816.3-201ENST00000604527 1066 ntBASIC1.56□□□□□ -2.16
USH2AO75445 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC1.56□□□□□ -2.16
USH2AO75445 AP000553.6-201ENST00000641242 118 ntBASIC1.56□□□□□ -2.16
USH2AO75445 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC1.56□□□□□ -2.16
USH2AO75445 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
USH2AO75445 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
USH2AO75445 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
USH2AO75445 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
USH2AO75445 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
USH2AO75445 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
USH2AO75445 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
USH2AO75445 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC1.56□□□□□ -2.16
USH2AO75445 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
USH2AO75445 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC1.56□□□□□ -2.16
USH2AO75445 RNU1-70P-201ENST00000362618 164 ntBASIC1.56□□□□□ -2.16
USH2AO75445 RNA5SP99-201ENST00000364020 114 ntBASIC1.56□□□□□ -2.16
USH2AO75445 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
USH2AO75445 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
USH2AO75445 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
USH2AO75445 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.56□□□□□ -2.16
USH2AO75445 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC1.56□□□□□ -2.16
USH2AO75445 AC044913.1-201ENST00000557200 430 ntBASIC1.56□□□□□ -2.16
USH2AO75445 AC245100.7-201ENST00000609678 442 ntBASIC1.56□□□□□ -2.16
USH2AO75445 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC1.56□□□□□ -2.16
USH2AO75445 THAP12P5-201ENST00000405864 2275 ntBASIC1.56□□□□□ -2.16
USH2AO75445 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC1.56□□□□□ -2.16
USH2AO75445 AC112198.2-201ENST00000426589 6996 ntBASIC1.56□□□□□ -2.16
USH2AO75445 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
USH2AO75445 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.56□□□□□ -2.16
USH2AO75445 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
USH2AO75445 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
USH2AO75445 RNU1-140P-201ENST00000365040 165 ntBASIC1.56□□□□□ -2.16
USH2AO75445 AC079809.1-201ENST00000415468 276 ntBASIC1.56□□□□□ -2.16
USH2AO75445 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC1.56□□□□□ -2.16
USH2AO75445 AC126389.1-201ENST00000477436 290 ntBASIC1.56□□□□□ -2.16
USH2AO75445 AC022080.3-201ENST00000544433 482 ntBASIC1.56□□□□□ -2.16
USH2AO75445 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC1.56□□□□□ -2.16
USH2AO75445 5S_rRNA.16-201ENST00000612928 119 ntBASIC1.56□□□□□ -2.16
USH2AO75445 AL353726.1-201ENST00000614041 1000 ntBASIC1.56□□□□□ -2.16
USH2AO75445 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
USH2AO75445 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
USH2AO75445 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC1.56□□□□□ -2.16
USH2AO75445 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC1.56□□□□□ -2.16
USH2AO75445 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
USH2AO75445 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
USH2AO75445 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
USH2AO75445 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
USH2AO75445 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC1.56□□□□□ -2.16
USH2AO75445 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC1.55□□□□□ -2.16
USH2AO75445 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC1.55□□□□□ -2.16
USH2AO75445 AL353692.2-201ENST00000407054 335 ntBASIC1.55□□□□□ -2.16
USH2AO75445 RN7SKP82-201ENST00000516786 223 ntBASIC1.55□□□□□ -2.16
USH2AO75445 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC1.55□□□□□ -2.16
USH2AO75445 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC1.55□□□□□ -2.16
USH2AO75445 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC1.55□□□□□ -2.16
USH2AO75445 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC1.55□□□□□ -2.16
USH2AO75445 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
USH2AO75445 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
USH2AO75445 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
USH2AO75445 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
USH2AO75445 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC1.55□□□□□ -2.16
USH2AO75445 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC1.55□□□□□ -2.16
USH2AO75445 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
USH2AO75445 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC1.55□□□□□ -2.16
USH2AO75445 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
USH2AO75445 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
USH2AO75445 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
USH2AO75445 VDAC1P9-201ENST00000412766 841 ntBASIC1.55□□□□□ -2.16
USH2AO75445 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
USH2AO75445 RPS15AP29-201ENST00000445539 400 ntBASIC1.55□□□□□ -2.16
USH2AO75445 RPL23AP11-201ENST00000475260 469 ntBASIC1.55□□□□□ -2.16
USH2AO75445 OR9N1P-201ENST00000491296 333 ntBASIC1.55□□□□□ -2.16
USH2AO75445 RPL31P61-201ENST00000496160 376 ntBASIC1.55□□□□□ -2.16
USH2AO75445 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC1.55□□□□□ -2.16
USH2AO75445 AC009097.3-201ENST00000563557 1018 ntBASIC1.55□□□□□ -2.16
USH2AO75445 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.55□□□□□ -2.16
USH2AO75445 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC1.55□□□□□ -2.16
USH2AO75445 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC1.55□□□□□ -2.16
USH2AO75445 AC100793.4-201ENST00000613683 429 ntBASIC1.55□□□□□ -2.16
USH2AO75445 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
USH2AO75445 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC1.55□□□□□ -2.16
USH2AO75445 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
USH2AO75445 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
USH2AO75445 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC1.55□□□□□ -2.16
USH2AO75445 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC1.55□□□□□ -2.16
USH2AO75445 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
USH2AO75445 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
USH2AO75445 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC1.55□□□□□ -2.16
USH2AO75445 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
USH2AO75445 BCLAF1P2-201ENST00000624956 2609 ntBASIC1.55□□□□□ -2.16
USH2AO75445 UBTFL3-201ENST00000418934 1024 ntBASIC1.55□□□□□ -2.16
USH2AO75445 AC146507.2-201ENST00000460608 476 ntBASIC1.55□□□□□ -2.16
USH2AO75445 AC108751.2-201ENST00000469993 231 ntBASIC1.55□□□□□ -2.16
USH2AO75445 SEPT7P6-201ENST00000469999 1143 ntBASIC1.55□□□□□ -2.16
USH2AO75445 UBTFL6-201ENST00000477929 1024 ntBASIC1.55□□□□□ -2.16
USH2AO75445 AC108022.1-201ENST00000493466 478 ntBASIC1.55□□□□□ -2.16
USH2AO75445 H3F3AP1-201ENST00000559984 334 ntBASIC1.55□□□□□ -2.16
USH2AO75445 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms