Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AL353746.1-201ENST00000566293 6881 ntBASIC2.84□□□□□ -1.95
SSSCA1O60232 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SSSCA1O60232 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
SSSCA1O60232 RPS4XP9-201ENST00000405151 780 ntBASIC2.84□□□□□ -1.95
SSSCA1O60232 AC013268.2-201ENST00000420753 337 ntBASIC2.84□□□□□ -1.95
SSSCA1O60232 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC2.84□□□□□ -1.95
SSSCA1O60232 AC007394.1-201ENST00000421941 531 ntBASIC2.84□□□□□ -1.95
SSSCA1O60232 AC068287.1-201ENST00000430283 295 ntBASIC2.84□□□□□ -1.95
SSSCA1O60232 CCNB1IP1P2-201ENST00000432876 818 ntBASIC2.84□□□□□ -1.95
SSSCA1O60232 FTH1P1-201ENST00000437933 532 ntBASIC2.84□□□□□ -1.95
SSSCA1O60232 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC2.84□□□□□ -1.95
SSSCA1O60232 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC2.84□□□□□ -1.95
SSSCA1O60232 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC2.84□□□□□ -1.95
SSSCA1O60232 CYCSP42-201ENST00000450823 238 ntBASIC2.84□□□□□ -1.95
SSSCA1O60232 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC2.84□□□□□ -1.95
SSSCA1O60232 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC2.84□□□□□ -1.95
SSSCA1O60232 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC2.84□□□□□ -1.95
SSSCA1O60232 RPS27P29-201ENST00000463110 252 ntBASIC2.84□□□□□ -1.95
SSSCA1O60232 RN7SL610P-201ENST00000463845 291 ntBASIC2.84□□□□□ -1.95
SSSCA1O60232 AC023598.1-201ENST00000472521 361 ntBASIC2.84□□□□□ -1.95
SSSCA1O60232 AC078785.3-201ENST00000476607 425 ntBASIC2.84□□□□□ -1.95
SSSCA1O60232 AC021205.2-201ENST00000480069 347 ntBASIC2.84□□□□□ -1.95
SSSCA1O60232 AP001086.1-201ENST00000494882 321 ntBASIC2.84□□□□□ -1.95
SSSCA1O60232 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
SSSCA1O60232 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC2.84□□□□□ -1.95
SSSCA1O60232 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC2.84□□□□□ -1.95
SSSCA1O60232 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC2.84□□□□□ -1.95
SSSCA1O60232 MED28P5-201ENST00000528254 438 ntBASIC2.84□□□□□ -1.95
SSSCA1O60232 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SSSCA1O60232 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC2.84□□□□□ -1.95
SSSCA1O60232 AC023575.1-201ENST00000580510 358 ntBASIC2.84□□□□□ -1.95
SSSCA1O60232 AP000919.1-202ENST00000581139 1264 ntBASIC2.84□□□□□ -1.95
SSSCA1O60232 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC2.84□□□□□ -1.95
SSSCA1O60232 AC112484.5-201ENST00000624189 228 ntBASIC2.84□□□□□ -1.95
SSSCA1O60232 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC2.84□□□□□ -1.95
SSSCA1O60232 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SSSCA1O60232 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
SSSCA1O60232 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
SSSCA1O60232 MFSD8-220ENST00000641243 1422 ntBASIC2.84□□□□□ -1.96
SSSCA1O60232 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.96
SSSCA1O60232 NMD3P1-201ENST00000439704 1488 ntBASIC2.84□□□□□ -1.96
SSSCA1O60232 USP8P1-201ENST00000494673 3183 ntBASIC2.84□□□□□ -1.96
SSSCA1O60232 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
SSSCA1O60232 AC009313.2-201ENST00000417893 1941 ntBASIC2.83□□□□□ -1.96
SSSCA1O60232 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.83□□□□□ -1.96
SSSCA1O60232 FAM91A3P-201ENST00000456826 2544 ntBASIC2.83□□□□□ -1.96
SSSCA1O60232 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SSSCA1O60232 AL445437.1-201ENST00000623157 3087 ntBASIC2.83□□□□□ -1.96
SSSCA1O60232 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.83□□□□□ -1.96
SSSCA1O60232 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
SSSCA1O60232 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
SSSCA1O60232 RNA5SP383-201ENST00000362934 120 ntBASIC2.83□□□□□ -1.96
SSSCA1O60232 SNORD56.3-201ENST00000363507 71 ntBASIC2.83□□□□□ -1.96
SSSCA1O60232 SNORA62-201ENST00000365493 153 ntBASIC2.83□□□□□ -1.96
SSSCA1O60232 AL022722.2-201ENST00000402519 180 ntBASIC2.83□□□□□ -1.96
SSSCA1O60232 AC069218.2-201ENST00000411665 344 ntBASIC2.83□□□□□ -1.96
SSSCA1O60232 AC126124.2-201ENST00000413542 321 ntBASIC2.83□□□□□ -1.96
SSSCA1O60232 AL356968.1-201ENST00000416622 474 ntBASIC2.83□□□□□ -1.96
SSSCA1O60232 AC092832.1-201ENST00000422934 400 ntBASIC2.83□□□□□ -1.96
SSSCA1O60232 BX890604.2-201ENST00000427883 474 ntBASIC2.83□□□□□ -1.96
SSSCA1O60232 AP000907.1-201ENST00000428428 510 ntBASIC2.83□□□□□ -1.96
SSSCA1O60232 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC2.83□□□□□ -1.96
SSSCA1O60232 AC073143.1-201ENST00000436316 395 ntBASIC2.83□□□□□ -1.96
SSSCA1O60232 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC2.83□□□□□ -1.96
SSSCA1O60232 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC2.83□□□□□ -1.96
SSSCA1O60232 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC2.83□□□□□ -1.96
SSSCA1O60232 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC2.83□□□□□ -1.96
SSSCA1O60232 FTH1P24-201ENST00000503502 462 ntBASIC2.83□□□□□ -1.96
SSSCA1O60232 LDHBP3-201ENST00000514909 822 ntBASIC2.83□□□□□ -1.96
SSSCA1O60232 RN7SKP5-201ENST00000517045 272 ntBASIC2.83□□□□□ -1.96
SSSCA1O60232 HIGD1AP10-201ENST00000527837 282 ntBASIC2.83□□□□□ -1.96
SSSCA1O60232 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC2.83□□□□□ -1.96
SSSCA1O60232 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC2.83□□□□□ -1.96
SSSCA1O60232 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
SSSCA1O60232 AC037471.2-201ENST00000564941 598 ntBASIC2.83□□□□□ -1.96
SSSCA1O60232 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC2.83□□□□□ -1.96
SSSCA1O60232 AC006254.3-201ENST00000603353 884 ntBASIC2.83□□□□□ -1.96
SSSCA1O60232 AC009948.4-201ENST00000604692 675 ntBASIC2.83□□□□□ -1.96
SSSCA1O60232 AC005344.1-201ENST00000613391 459 ntBASIC2.83□□□□□ -1.96
SSSCA1O60232 FP236240.3-201ENST00000623061 327 ntBASIC2.83□□□□□ -1.96
SSSCA1O60232 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SSSCA1O60232 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.83□□□□□ -1.96
SSSCA1O60232 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SSSCA1O60232 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC2.83□□□□□ -1.96
SSSCA1O60232 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SSSCA1O60232 SYT14P1-202ENST00000600441 1448 ntBASIC2.83□□□□□ -1.96
SSSCA1O60232 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SSSCA1O60232 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
SSSCA1O60232 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SSSCA1O60232 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
SSSCA1O60232 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
SSSCA1O60232 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
SSSCA1O60232 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.82□□□□□ -1.96
SSSCA1O60232 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SSSCA1O60232 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
SSSCA1O60232 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SSSCA1O60232 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SSSCA1O60232 PTMAP5-201ENST00000393073 333 ntBASIC2.82□□□□□ -1.96
SSSCA1O60232 AL136131.1-201ENST00000406079 803 ntBASIC2.82□□□□□ -1.96
SSSCA1O60232 RNA5SP293-201ENST00000410527 113 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 149.7 ms