Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
PRPF3O43395 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.43□□□□□ -1.54
PRPF3O43395 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
PRPF3O43395 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PRPF3O43395 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PRPF3O43395 Y_RNA.25-201ENST00000362528 102 ntBASIC5.43□□□□□ -1.54
PRPF3O43395 Y_RNA.311-201ENST00000365068 96 ntBASIC5.43□□□□□ -1.54
PRPF3O43395 AL080315.1-201ENST00000406055 466 ntBASIC5.43□□□□□ -1.54
PRPF3O43395 MIR1271-201ENST00000408537 86 ntBASIC5.43□□□□□ -1.54
PRPF3O43395 AC004022.2-201ENST00000413824 193 ntBASIC5.43□□□□□ -1.54
PRPF3O43395 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.43□□□□□ -1.54
PRPF3O43395 RPS3AP9-201ENST00000417027 792 ntBASIC5.43□□□□□ -1.54
PRPF3O43395 RBMY2KP-201ENST00000418221 992 ntBASIC5.43□□□□□ -1.54
PRPF3O43395 AC140479.3-201ENST00000418944 1126 ntBASIC5.43□□□□□ -1.54
PRPF3O43395 MTCO3P1-205ENST00000422088 832 ntBASIC5.43□□□□□ -1.54
PRPF3O43395 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.43□□□□□ -1.54
PRPF3O43395 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.43□□□□□ -1.54
PRPF3O43395 AC096632.1-201ENST00000427395 310 ntBASIC5.43□□□□□ -1.54
PRPF3O43395 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PRPF3O43395 AC073143.1-201ENST00000436316 395 ntBASIC5.43□□□□□ -1.54
PRPF3O43395 NPM1P33-201ENST00000438918 872 ntBASIC5.43□□□□□ -1.54
PRPF3O43395 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.43□□□□□ -1.54
PRPF3O43395 MTATP6P26-201ENST00000445926 662 ntBASIC5.43□□□□□ -1.54
PRPF3O43395 AL031584.1-201ENST00000447169 754 ntBASIC5.43□□□□□ -1.54
PRPF3O43395 MTND1P16-201ENST00000465177 898 ntBASIC5.43□□□□□ -1.54
PRPF3O43395 AC090142.1-201ENST00000465776 462 ntBASIC5.43□□□□□ -1.54
PRPF3O43395 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.43□□□□□ -1.54
PRPF3O43395 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.43□□□□□ -1.54
PRPF3O43395 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PRPF3O43395 AC119751.5-201ENST00000514077 770 ntBASIC5.43□□□□□ -1.54
PRPF3O43395 IGKV1-32-201ENST00000519290 311 ntBASIC5.43□□□□□ -1.54
PRPF3O43395 AP001636.2-201ENST00000525517 696 ntBASIC5.43□□□□□ -1.54
PRPF3O43395 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.43□□□□□ -1.54
PRPF3O43395 ZNF321P-202ENST00000550843 495 ntBASIC5.43□□□□□ -1.54
PRPF3O43395 RNF138P2-201ENST00000603490 592 ntBASIC5.43□□□□□ -1.54
PRPF3O43395 AC080013.3-201ENST00000606839 578 ntBASIC5.43□□□□□ -1.54
PRPF3O43395 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC5.43□□□□□ -1.54
PRPF3O43395 AC004948.1-201ENST00000609858 672 ntBASIC5.43□□□□□ -1.54
PRPF3O43395 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.43□□□□□ -1.54
PRPF3O43395 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.43□□□□□ -1.54
PRPF3O43395 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PRPF3O43395 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.43□□□□□ -1.54
PRPF3O43395 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PRPF3O43395 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.43□□□□□ -1.54
PRPF3O43395 AL390862.1-201ENST00000635467 1469 ntBASIC5.43□□□□□ -1.54
PRPF3O43395 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PRPF3O43395 AC109315.1-201ENST00000584143 1347 ntBASIC5.43□□□□□ -1.54
PRPF3O43395 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PRPF3O43395 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.43□□□□□ -1.54
PRPF3O43395 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.42□□□□□ -1.54
PRPF3O43395 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PRPF3O43395 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PRPF3O43395 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PRPF3O43395 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
PRPF3O43395 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
PRPF3O43395 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PRPF3O43395 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PRPF3O43395 RNU5D-1-201ENST00000363299 116 ntBASIC5.42□□□□□ -1.54
PRPF3O43395 AL078604.1-201ENST00000404609 466 ntBASIC5.42□□□□□ -1.54
PRPF3O43395 AL356131.1-201ENST00000405826 414 ntBASIC5.42□□□□□ -1.54
PRPF3O43395 AL512430.2-201ENST00000406786 339 ntBASIC5.42□□□□□ -1.54
PRPF3O43395 RPL23AP47-201ENST00000408017 460 ntBASIC5.42□□□□□ -1.54
PRPF3O43395 RN7SKP267-201ENST00000410381 285 ntBASIC5.42□□□□□ -1.54
PRPF3O43395 AL133384.1-201ENST00000412744 351 ntBASIC5.42□□□□□ -1.54
PRPF3O43395 RPL30P3-201ENST00000424262 333 ntBASIC5.42□□□□□ -1.54
PRPF3O43395 AC012519.1-201ENST00000424588 610 ntBASIC5.42□□□□□ -1.54
PRPF3O43395 AC234779.1-201ENST00000425910 285 ntBASIC5.42□□□□□ -1.54
PRPF3O43395 RPP40P1-201ENST00000426762 456 ntBASIC5.42□□□□□ -1.54
PRPF3O43395 USP9YP9-201ENST00000429406 715 ntBASIC5.42□□□□□ -1.54
PRPF3O43395 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC5.42□□□□□ -1.54
PRPF3O43395 AL049745.1-201ENST00000433953 286 ntBASIC5.42□□□□□ -1.54
PRPF3O43395 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.42□□□□□ -1.54
PRPF3O43395 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.42□□□□□ -1.54
PRPF3O43395 MTND3P1-201ENST00000441336 220 ntBASIC5.42□□□□□ -1.54
PRPF3O43395 MTCYBP11-201ENST00000447254 1109 ntBASIC5.42□□□□□ -1.54
PRPF3O43395 AC104978.1-201ENST00000449387 391 ntBASIC5.42□□□□□ -1.54
PRPF3O43395 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC5.42□□□□□ -1.54
PRPF3O43395 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PRPF3O43395 AC093534.1-201ENST00000504977 132 ntBASIC5.42□□□□□ -1.54
PRPF3O43395 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.42□□□□□ -1.54
PRPF3O43395 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.42□□□□□ -1.54
PRPF3O43395 MTND1P22-201ENST00000510572 951 ntBASIC5.42□□□□□ -1.54
PRPF3O43395 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC5.42□□□□□ -1.54
PRPF3O43395 AL671862.1-201ENST00000515851 349 ntBASIC5.42□□□□□ -1.54
PRPF3O43395 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.42□□□□□ -1.54
PRPF3O43395 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.42□□□□□ -1.54
PRPF3O43395 OR4A12P-201ENST00000530847 918 ntBASIC5.42□□□□□ -1.54
PRPF3O43395 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.42□□□□□ -1.54
PRPF3O43395 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.42□□□□□ -1.54
PRPF3O43395 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.42□□□□□ -1.54
PRPF3O43395 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
PRPF3O43395 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.42□□□□□ -1.54
PRPF3O43395 AC073091.2-201ENST00000603205 907 ntBASIC5.42□□□□□ -1.54
PRPF3O43395 IMMP1LP1-201ENST00000605170 488 ntBASIC5.42□□□□□ -1.54
PRPF3O43395 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.42□□□□□ -1.54
PRPF3O43395 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.42□□□□□ -1.54
PRPF3O43395 AP001784.1-201ENST00000624107 428 ntBASIC5.42□□□□□ -1.54
PRPF3O43395 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PRPF3O43395 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.42□□□□□ -1.54
PRPF3O43395 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms