Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC015726.1-201ENST00000602353 681 ntBASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 AL139286.1-201ENST00000604465 483 ntBASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC114878.2-201ENST00000604863 1251 ntBASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 FP236240.3-201ENST00000623061 327 ntBASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 AL773545.4-201ENST00000637262 310 ntBASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 AL513478.4-201ENST00000641636 310 ntBASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 NCAPGP1-201ENST00000505112 1814 ntBASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC006504.1-201ENST00000562493 3666 ntBASIC3.81□□□□□ -1.8
TMX2-CTNND1H3BSU7 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.8□□□□□ -1.8
TMX2-CTNND1H3BSU7 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.8□□□□□ -1.8
TMX2-CTNND1H3BSU7 RNU6-1279P-201ENST00000383917 103 ntBASIC3.8□□□□□ -1.8
TMX2-CTNND1H3BSU7 PGBD4P8-201ENST00000412993 562 ntBASIC3.8□□□□□ -1.8
TMX2-CTNND1H3BSU7 RPL7AP73-201ENST00000413490 353 ntBASIC3.8□□□□□ -1.8
TMX2-CTNND1H3BSU7 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TMX2-CTNND1H3BSU7 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.8□□□□□ -1.8
TMX2-CTNND1H3BSU7 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.8□□□□□ -1.8
TMX2-CTNND1H3BSU7 RSL24D1P8-201ENST00000434442 492 ntBASIC3.8□□□□□ -1.8
TMX2-CTNND1H3BSU7 RPL12P46-201ENST00000436610 195 ntBASIC3.8□□□□□ -1.8
TMX2-CTNND1H3BSU7 RN7SL93P-201ENST00000463035 293 ntBASIC3.8□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC3.8□□□□□ -1.8
TMX2-CTNND1H3BSU7 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.8□□□□□ -1.8
TMX2-CTNND1H3BSU7 PPIAP15-201ENST00000479662 484 ntBASIC3.8□□□□□ -1.8
TMX2-CTNND1H3BSU7 RN7SKP34-201ENST00000516142 244 ntBASIC3.8□□□□□ -1.8
TMX2-CTNND1H3BSU7 RNU1-95P-201ENST00000516357 160 ntBASIC3.8□□□□□ -1.8
TMX2-CTNND1H3BSU7 RNU1-128P-201ENST00000516704 160 ntBASIC3.8□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.8□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC104997.1-201ENST00000519761 717 ntBASIC3.8□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3.8□□□□□ -1.8
TMX2-CTNND1H3BSU7 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.8□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.8□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC091167.4-201ENST00000605079 184 ntBASIC3.8□□□□□ -1.8
TMX2-CTNND1H3BSU7 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.8□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC020978.9-201ENST00000624380 1141 ntBASIC3.8□□□□□ -1.8
TMX2-CTNND1H3BSU7 AF001550.2-201ENST00000636643 217 ntBASIC3.8□□□□□ -1.8
TMX2-CTNND1H3BSU7 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
TMX2-CTNND1H3BSU7 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TMX2-CTNND1H3BSU7 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
TMX2-CTNND1H3BSU7 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TMX2-CTNND1H3BSU7 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TMX2-CTNND1H3BSU7 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
TMX2-CTNND1H3BSU7 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.79□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.79□□□□□ -1.8
TMX2-CTNND1H3BSU7 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.79□□□□□ -1.8
TMX2-CTNND1H3BSU7 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TMX2-CTNND1H3BSU7 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC3.79□□□□□ -1.8
TMX2-CTNND1H3BSU7 AL603766.1-201ENST00000407763 664 ntBASIC3.79□□□□□ -1.8
TMX2-CTNND1H3BSU7 TRIM60P13-201ENST00000432350 1283 ntBASIC3.79□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.79□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC009263.1-201ENST00000441193 1239 ntBASIC3.79□□□□□ -1.8
TMX2-CTNND1H3BSU7 AL157884.3-201ENST00000448273 1184 ntBASIC3.79□□□□□ -1.8
TMX2-CTNND1H3BSU7 NDUFS5P3-201ENST00000450668 321 ntBASIC3.79□□□□□ -1.8
TMX2-CTNND1H3BSU7 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC3.79□□□□□ -1.8
TMX2-CTNND1H3BSU7 IFNWP4-201ENST00000453148 294 ntBASIC3.79□□□□□ -1.8
TMX2-CTNND1H3BSU7 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.79□□□□□ -1.8
TMX2-CTNND1H3BSU7 RPL31P53-201ENST00000457065 348 ntBASIC3.79□□□□□ -1.8
TMX2-CTNND1H3BSU7 OR52A4P-202ENST00000481634 799 ntBASIC3.79□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.79□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.79□□□□□ -1.8
TMX2-CTNND1H3BSU7 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.79□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC099489.2-201ENST00000574976 260 ntBASIC3.79□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.79□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.79□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC3.79□□□□□ -1.8
TMX2-CTNND1H3BSU7 SNX6P1-201ENST00000601728 1224 ntBASIC3.79□□□□□ -1.8
TMX2-CTNND1H3BSU7 Z82195.1-201ENST00000604558 398 ntBASIC3.79□□□□□ -1.8
TMX2-CTNND1H3BSU7 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.79□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.79□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC128687.2-201ENST00000609657 566 ntBASIC3.79□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC003001.2-201ENST00000616294 831 ntBASIC3.79□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC009032.1-201ENST00000617574 431 ntBASIC3.79□□□□□ -1.8
TMX2-CTNND1H3BSU7 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.79□□□□□ -1.8
TMX2-CTNND1H3BSU7 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
TMX2-CTNND1H3BSU7 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
TMX2-CTNND1H3BSU7 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.79□□□□□ -1.8
TMX2-CTNND1H3BSU7 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 HMGN2P8-201ENST00000391458 268 ntBASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC104297.1-201ENST00000393779 870 ntBASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 MTND2P15-201ENST00000418575 892 ntBASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 RPL23AP83-201ENST00000434984 473 ntBASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms