Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 MTND5P28-201ENST00000438005 1594 ntBASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 ELL2P4-201ENST00000446870 1376 ntBASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 AC011155.1-201ENST00000316512 456 ntBASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 Y_RNA.28-201ENST00000362554 111 ntBASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 RNA5SP350-201ENST00000363298 111 ntBASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 RNU6-1309P-201ENST00000363305 108 ntBASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 RNA5SP382-201ENST00000363355 112 ntBASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 RNA5SP355-201ENST00000365317 135 ntBASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 AL592114.1-201ENST00000403842 483 ntBASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 RPS4XP9-201ENST00000405151 780 ntBASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 HMGN1P24-201ENST00000412282 298 ntBASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 RPL37P10-201ENST00000412884 288 ntBASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 AL929472.1-201ENST00000417484 429 ntBASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 TVP23CP1-201ENST00000450317 639 ntBASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 ALDH7A1P3-201ENST00000492517 345 ntBASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 AC116562.3-201ENST00000506136 177 ntBASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 RNU2-10P-201ENST00000516375 211 ntBASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 AC018442.3-201ENST00000523025 183 ntBASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 AC130366.1-201ENST00000526505 1192 ntBASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 AC068587.5-201ENST00000528506 175 ntBASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 AC010287.1-201ENST00000566916 357 ntBASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 PSMA6P4-201ENST00000603247 718 ntBASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 AL592148.3-201ENST00000608771 2646 ntBASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC6.37□□□□□ -1.39
PCDHGA11Q9Y5H2 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 AC005332.9-201ENST00000620266 2921 ntBASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 SLC2A3P1-201ENST00000519666 1451 ntBASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 AC010624.4-201ENST00000597606 1351 ntBASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 Y_RNA.22-201ENST00000362492 102 ntBASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 SNORA62.1-201ENST00000364287 154 ntBASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 RNU6-522P-201ENST00000364497 107 ntBASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 U3.12-201ENST00000364498 214 ntBASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 MDM4-202ENST00000367180 547 ntTSL 3 BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 MIR548K-201ENST00000408406 116 ntBASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 AC069218.2-201ENST00000411665 344 ntBASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 RPSAP35-201ENST00000413753 818 ntBASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 AL359092.1-201ENST00000417156 265 ntBASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 AC068533.1-201ENST00000418542 415 ntBASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 AC005517.2-201ENST00000424673 553 ntBASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 PSMA6P3-201ENST00000428242 164 ntBASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 MTATP6P16-201ENST00000434543 526 ntBASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 AC093853.1-201ENST00000515689 483 ntBASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 RNA5SP503-201ENST00000517047 117 ntBASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 AP005435.4-201ENST00000529514 284 ntBASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 TRIM51DP-201ENST00000529746 596 ntBASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 AC063950.1-201ENST00000552036 308 ntBASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 AC004817.2-201ENST00000561794 651 ntBASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 MIR4775-201ENST00000581168 75 ntBASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 MIR5690-201ENST00000583739 73 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms