Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 VPS35P1-201ENST00000563400 1518 ntBASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 AC090337.1-201ENST00000579651 2074 ntBASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 DOCK11P1-201ENST00000553480 5932 ntBASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGC4Q9Y5F7 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 Y_RNA.158-201ENST00000363651 101 ntBASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 RNU6-606P-201ENST00000384721 111 ntBASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 MIR433-201ENST00000384837 93 ntBASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 AC092642.1-201ENST00000392417 425 ntBASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 MIR548F5-201ENST00000408421 86 ntBASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 RNU6-193P-201ENST00000410977 107 ntBASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 AL035422.1-201ENST00000414193 397 ntBASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 AC233981.1-201ENST00000423224 461 ntBASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 RPS20P32-201ENST00000456044 356 ntBASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 GMFBP1-201ENST00000467831 427 ntBASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 RPL23AP71-201ENST00000470966 469 ntBASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 AL161747.1-201ENST00000480068 358 ntBASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 RPL21P99-201ENST00000480369 423 ntBASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 RPL12P30-201ENST00000488389 499 ntBASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 SNX18P24-201ENST00000505249 671 ntBASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 RNU6-410P-201ENST00000517006 107 ntBASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 AC036111.2-201ENST00000533247 901 ntBASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 MIR3154-201ENST00000577829 84 ntBASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 MAGOH2P-202ENST00000584384 429 ntBASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 AP001029.3-201ENST00000588063 596 ntBASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 SMIM12P1-201ENST00000603004 274 ntBASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 AC008782.1-201ENST00000603386 430 ntBASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 AC083806.3-201ENST00000614016 455 ntBASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 AC096861.1-201ENST00000616652 240 ntBASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 AP001541.1-201ENST00000623322 1904 ntBASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGC4Q9Y5F7 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGC4Q9Y5F7 AC097504.1-201ENST00000515103 2415 ntBASIC6.31□□□□□ -1.4
PCDHGC4Q9Y5F7 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
PCDHGC4Q9Y5F7 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDHGC4Q9Y5F7 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGC4Q9Y5F7 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
PCDHGC4Q9Y5F7 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGC4Q9Y5F7 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGC4Q9Y5F7 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.31□□□□□ -1.4
PCDHGC4Q9Y5F7 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.31□□□□□ -1.4
PCDHGC4Q9Y5F7 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
PCDHGC4Q9Y5F7 AC007114.2-201ENST00000576014 4281 ntBASIC6.31□□□□□ -1.4
PCDHGC4Q9Y5F7 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDHGC4Q9Y5F7 AC079753.1-201ENST00000623243 3868 ntBASIC6.31□□□□□ -1.4
PCDHGC4Q9Y5F7 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGC4Q9Y5F7 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGC4Q9Y5F7 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDHGC4Q9Y5F7 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGC4Q9Y5F7 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGC4Q9Y5F7 RNU1-49P-201ENST00000363468 159 ntBASIC6.31□□□□□ -1.4
PCDHGC4Q9Y5F7 RN7SKP187-201ENST00000365536 330 ntBASIC6.31□□□□□ -1.4
PCDHGC4Q9Y5F7 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGC4Q9Y5F7 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
PCDHGC4Q9Y5F7 DHFRP6-201ENST00000401776 268 ntBASIC6.31□□□□□ -1.4
PCDHGC4Q9Y5F7 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
PCDHGC4Q9Y5F7 MIR1275-201ENST00000408770 80 ntBASIC6.31□□□□□ -1.4
PCDHGC4Q9Y5F7 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGC4Q9Y5F7 RPL7AP14-201ENST00000424041 802 ntBASIC6.31□□□□□ -1.4
PCDHGC4Q9Y5F7 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.31□□□□□ -1.4
PCDHGC4Q9Y5F7 AC006548.1-201ENST00000427470 102 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms