Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AC069061.3-201ENST00000582254 823 ntBASIC3.33□□□□□ -1.88
RCL1Q9Y2P8 AC012417.1-201ENST00000582307 1039 ntBASIC3.33□□□□□ -1.88
RCL1Q9Y2P8 MIR4443-201ENST00000585052 53 ntBASIC3.33□□□□□ -1.88
RCL1Q9Y2P8 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC3.33□□□□□ -1.88
RCL1Q9Y2P8 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.33□□□□□ -1.88
RCL1Q9Y2P8 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.33□□□□□ -1.88
RCL1Q9Y2P8 uc_338.13-201ENST00000618243 179 ntBASIC3.33□□□□□ -1.88
RCL1Q9Y2P8 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.33□□□□□ -1.88
RCL1Q9Y2P8 AL445528.2-201ENST00000620582 470 ntBASIC3.33□□□□□ -1.88
RCL1Q9Y2P8 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RCL1Q9Y2P8 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
RCL1Q9Y2P8 AC026951.1-201ENST00000559530 2459 ntBASIC3.33□□□□□ -1.88
RCL1Q9Y2P8 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
RCL1Q9Y2P8 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RCL1Q9Y2P8 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RCL1Q9Y2P8 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.33□□□□□ -1.88
RCL1Q9Y2P8 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
RCL1Q9Y2P8 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 AL512646.1-201ENST00000269395 1077 ntBASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 SNORA58B-201ENST00000364259 136 ntBASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 PRRC2CP1-201ENST00000404428 159 ntBASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 SNORA11F-201ENST00000408237 128 ntBASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 RNA5SP36-201ENST00000410197 133 ntBASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 AC016769.2-201ENST00000414815 475 ntBASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 TMSB10P2-201ENST00000416049 131 ntBASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 UQCRBP1-201ENST00000421129 336 ntBASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 AC115285.1-201ENST00000424879 736 ntBASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 OR5AW1P-201ENST00000426334 1006 ntBASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 AC006466.1-201ENST00000438721 289 ntBASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 AL512326.1-201ENST00000443050 721 ntBASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 AC006326.1-201ENST00000445465 787 ntBASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 AC083982.1-201ENST00000485679 344 ntBASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 RNA5SP73-201ENST00000516744 108 ntBASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 RNU7-143P-201ENST00000516781 65 ntBASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 HMGB1P23-201ENST00000518743 568 ntBASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 BRD9P1-201ENST00000529855 560 ntBASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 AP004242.1-201ENST00000533701 349 ntBASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 SERPINE4P-201ENST00000554978 281 ntBASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 RN7SL690P-201ENST00000582087 240 ntBASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 EIF1P6-201ENST00000600054 334 ntBASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 AC008782.1-201ENST00000603386 430 ntBASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 AC115286.1-201ENST00000604298 434 ntBASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 AC004775.1-201ENST00000607389 753 ntBASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 AP005019.3-201ENST00000620418 560 ntBASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 AC140479.6-201ENST00000633535 357 ntBASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 MTCO1P24-201ENST00000515438 1558 ntBASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 UBE3AP2-201ENST00000429033 2259 ntBASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RCL1Q9Y2P8 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.31□□□□□ -1.88
RCL1Q9Y2P8 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
RCL1Q9Y2P8 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RCL1Q9Y2P8 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
RCL1Q9Y2P8 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RCL1Q9Y2P8 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
RCL1Q9Y2P8 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.31□□□□□ -1.88
RCL1Q9Y2P8 MIR423-201ENST00000362201 94 ntBASIC3.31□□□□□ -1.88
RCL1Q9Y2P8 SNORD35B-201ENST00000363660 87 ntBASIC3.31□□□□□ -1.88
RCL1Q9Y2P8 SNORD113.2-201ENST00000364166 89 ntBASIC3.31□□□□□ -1.88
RCL1Q9Y2P8 SNORA51.12-201ENST00000384448 134 ntBASIC3.31□□□□□ -1.88
RCL1Q9Y2P8 AL133270.1-201ENST00000402635 279 ntBASIC3.31□□□□□ -1.88
RCL1Q9Y2P8 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.31□□□□□ -1.88
RCL1Q9Y2P8 AL139128.1-201ENST00000413921 941 ntBASIC3.31□□□□□ -1.88
RCL1Q9Y2P8 MFSD13B-201ENST00000420133 1290 ntBASIC3.31□□□□□ -1.88
RCL1Q9Y2P8 AC104837.2-201ENST00000427236 424 ntBASIC3.31□□□□□ -1.88
RCL1Q9Y2P8 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.31□□□□□ -1.88
RCL1Q9Y2P8 CKS1BP5-201ENST00000434172 273 ntBASIC3.31□□□□□ -1.88
RCL1Q9Y2P8 KCTD9P3-201ENST00000434597 1169 ntBASIC3.31□□□□□ -1.88
RCL1Q9Y2P8 RPL23AP46-201ENST00000438548 490 ntBASIC3.31□□□□□ -1.88
RCL1Q9Y2P8 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.31□□□□□ -1.88
RCL1Q9Y2P8 AC068135.1-201ENST00000446164 246 ntBASIC3.31□□□□□ -1.88
RCL1Q9Y2P8 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms