Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.53□□□□□ -1.69
SCN11AQ9UI33 RPL26P28-201ENST00000451325 435 ntBASIC4.53□□□□□ -1.69
SCN11AQ9UI33 AC006445.1-201ENST00000491925 405 ntBASIC4.53□□□□□ -1.69
SCN11AQ9UI33 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.53□□□□□ -1.69
SCN11AQ9UI33 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.53□□□□□ -1.69
SCN11AQ9UI33 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.53□□□□□ -1.69
SCN11AQ9UI33 SCARNA15.3-201ENST00000626315 122 ntBASIC4.53□□□□□ -1.69
SCN11AQ9UI33 SCARNA4.1-201ENST00000628597 123 ntBASIC4.53□□□□□ -1.69
SCN11AQ9UI33 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.52□□□□□ -1.69
SCN11AQ9UI33 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SCN11AQ9UI33 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SCN11AQ9UI33 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.52□□□□□ -1.69
SCN11AQ9UI33 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SCN11AQ9UI33 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.52□□□□□ -1.69
SCN11AQ9UI33 ELOCP18-201ENST00000434209 337 ntBASIC4.52□□□□□ -1.69
SCN11AQ9UI33 RPS20P1-201ENST00000434853 354 ntBASIC4.52□□□□□ -1.69
SCN11AQ9UI33 RPL5P24-201ENST00000463742 885 ntBASIC4.52□□□□□ -1.69
SCN11AQ9UI33 AC010469.1-201ENST00000463864 576 ntBASIC4.52□□□□□ -1.69
SCN11AQ9UI33 AC109925.1-201ENST00000478069 331 ntBASIC4.52□□□□□ -1.69
SCN11AQ9UI33 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.52□□□□□ -1.69
SCN11AQ9UI33 BTF3L4P4-201ENST00000506381 449 ntBASIC4.52□□□□□ -1.69
SCN11AQ9UI33 FCF1P8-201ENST00000510322 597 ntBASIC4.52□□□□□ -1.69
SCN11AQ9UI33 PHBP14-201ENST00000512887 367 ntBASIC4.52□□□□□ -1.69
SCN11AQ9UI33 HIGD1AP18-201ENST00000520730 278 ntBASIC4.52□□□□□ -1.69
SCN11AQ9UI33 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.52□□□□□ -1.69
SCN11AQ9UI33 MIR486-1-201ENST00000612171 68 ntBASIC4.52□□□□□ -1.69
SCN11AQ9UI33 AC074276.2-201ENST00000619891 348 ntBASIC4.52□□□□□ -1.69
SCN11AQ9UI33 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SCN11AQ9UI33 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SCN11AQ9UI33 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
SCN11AQ9UI33 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.52□□□□□ -1.69
SCN11AQ9UI33 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.52□□□□□ -1.69
SCN11AQ9UI33 AC139713.2-215ENST00000641428 5037 ntBASIC4.52□□□□□ -1.69
SCN11AQ9UI33 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.52□□□□□ -1.69
SCN11AQ9UI33 DDX6P1-205ENST00000441966 1436 ntBASIC4.51□□□□□ -1.69
SCN11AQ9UI33 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SCN11AQ9UI33 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SCN11AQ9UI33 AL034403.1-201ENST00000399414 885 ntBASIC4.51□□□□□ -1.69
SCN11AQ9UI33 RSL24D1P1-201ENST00000404972 493 ntBASIC4.51□□□□□ -1.69
SCN11AQ9UI33 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.51□□□□□ -1.69
SCN11AQ9UI33 MTCO1P45-201ENST00000431457 267 ntBASIC4.51□□□□□ -1.69
SCN11AQ9UI33 YWHAEP5-201ENST00000431545 765 ntBASIC4.51□□□□□ -1.69
SCN11AQ9UI33 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.51□□□□□ -1.69
SCN11AQ9UI33 NPM1P17-201ENST00000479221 602 ntBASIC4.51□□□□□ -1.69
SCN11AQ9UI33 RN7SL809P-201ENST00000482040 297 ntBASIC4.51□□□□□ -1.69
SCN11AQ9UI33 HMGB3P13-201ENST00000511263 607 ntBASIC4.51□□□□□ -1.69
SCN11AQ9UI33 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.51□□□□□ -1.69
SCN11AQ9UI33 AL139395.1-201ENST00000603662 160 ntBASIC4.51□□□□□ -1.69
SCN11AQ9UI33 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.51□□□□□ -1.69
SCN11AQ9UI33 CR392039.4-201ENST00000624968 501 ntBASIC4.51□□□□□ -1.69
SCN11AQ9UI33 AL645937.1-201ENST00000641739 1652 ntBASIC4.51□□□□□ -1.69
SCN11AQ9UI33 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SCN11AQ9UI33 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
SCN11AQ9UI33 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.51□□□□□ -1.69
SCN11AQ9UI33 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.51□□□□□ -1.69
SCN11AQ9UI33 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SCN11AQ9UI33 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.51□□□□□ -1.69
SCN11AQ9UI33 Y_RNA.510-201ENST00000384511 114 ntBASIC4.5□□□□□ -1.69
SCN11AQ9UI33 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.5□□□□□ -1.69
SCN11AQ9UI33 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.5□□□□□ -1.69
SCN11AQ9UI33 AF228730.2-201ENST00000438784 848 ntBASIC4.5□□□□□ -1.69
SCN11AQ9UI33 FTH1P9-201ENST00000513251 355 ntBASIC4.5□□□□□ -1.69
SCN11AQ9UI33 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.5□□□□□ -1.69
SCN11AQ9UI33 IGHV3-32-201ENST00000519182 355 ntBASIC4.5□□□□□ -1.69
SCN11AQ9UI33 OR5AP1P-201ENST00000529730 940 ntBASIC4.5□□□□□ -1.69
SCN11AQ9UI33 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.5□□□□□ -1.69
SCN11AQ9UI33 MIR5004-201ENST00000579078 107 ntBASIC4.5□□□□□ -1.69
SCN11AQ9UI33 AC068790.5-201ENST00000602741 355 ntBASIC4.5□□□□□ -1.69
SCN11AQ9UI33 MIR7112-201ENST00000616126 65 ntBASIC4.5□□□□□ -1.69
SCN11AQ9UI33 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
SCN11AQ9UI33 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
SCN11AQ9UI33 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.5□□□□□ -1.69
SCN11AQ9UI33 BMS1P3-201ENST00000372011 932 ntBASIC4.5□□□□□ -1.69
SCN11AQ9UI33 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SCN11AQ9UI33 JKAMPP1-201ENST00000413804 919 ntBASIC4.5□□□□□ -1.69
SCN11AQ9UI33 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.5□□□□□ -1.69
SCN11AQ9UI33 RPL23AP82-202ENST00000427528 469 ntBASIC4.5□□□□□ -1.69
SCN11AQ9UI33 IFNNP1-201ENST00000429219 553 ntBASIC4.5□□□□□ -1.69
SCN11AQ9UI33 CENPBD1P1-201ENST00000464061 469 ntBASIC4.5□□□□□ -1.69
SCN11AQ9UI33 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.5□□□□□ -1.69
SCN11AQ9UI33 RPS3AP50-201ENST00000487064 803 ntBASIC4.5□□□□□ -1.69
SCN11AQ9UI33 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SCN11AQ9UI33 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.5□□□□□ -1.69
SCN11AQ9UI33 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.5□□□□□ -1.69
SCN11AQ9UI33 AP005205.1-201ENST00000563503 508 ntBASIC4.5□□□□□ -1.69
SCN11AQ9UI33 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.5□□□□□ -1.69
SCN11AQ9UI33 AC026422.1-201ENST00000623961 452 ntBASIC4.5□□□□□ -1.69
SCN11AQ9UI33 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SCN11AQ9UI33 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
SCN11AQ9UI33 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.49□□□□□ -1.69
SCN11AQ9UI33 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SCN11AQ9UI33 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SCN11AQ9UI33 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.49□□□□□ -1.69
SCN11AQ9UI33 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
SCN11AQ9UI33 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SCN11AQ9UI33 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SCN11AQ9UI33 RPS24P12-201ENST00000402084 394 ntBASIC4.49□□□□□ -1.69
SCN11AQ9UI33 BX323014.1-201ENST00000412876 237 ntBASIC4.49□□□□□ -1.69
SCN11AQ9UI33 RPF2P1-201ENST00000424137 906 ntBASIC4.49□□□□□ -1.69
SCN11AQ9UI33 RPL7P44-201ENST00000424827 742 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms