Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC8.45□□□□□ -1.06
RTN4Q9NQC3 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
RTN4Q9NQC3 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
RTN4Q9NQC3 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC8.45□□□□□ -1.06
RTN4Q9NQC3 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
RTN4Q9NQC3 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
RTN4Q9NQC3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC8.44□□□□□ -1.06
RTN4Q9NQC3 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
RTN4Q9NQC3 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC8.44□□□□□ -1.06
RTN4Q9NQC3 AC104118.1-201ENST00000607625 1589 ntBASIC8.44□□□□□ -1.06
RTN4Q9NQC3 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
RTN4Q9NQC3 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
RTN4Q9NQC3 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
RTN4Q9NQC3 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
RTN4Q9NQC3 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
RTN4Q9NQC3 RNU6-76P-201ENST00000384060 104 ntBASIC8.44□□□□□ -1.06
RTN4Q9NQC3 RNU6-43P-201ENST00000384302 107 ntBASIC8.44□□□□□ -1.06
RTN4Q9NQC3 RNU6-393P-201ENST00000384475 107 ntBASIC8.44□□□□□ -1.06
RTN4Q9NQC3 TRBV5-3-201ENST00000390362 343 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
RTN4Q9NQC3 AL133388.1-201ENST00000404509 287 ntBASIC8.44□□□□□ -1.06
RTN4Q9NQC3 AL139095.3-201ENST00000419672 1203 ntBASIC8.44□□□□□ -1.06
RTN4Q9NQC3 RPL23AP69-201ENST00000431134 458 ntBASIC8.44□□□□□ -1.06
RTN4Q9NQC3 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC8.44□□□□□ -1.06
RTN4Q9NQC3 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC8.44□□□□□ -1.06
RTN4Q9NQC3 MTND4P17-201ENST00000470444 350 ntBASIC8.44□□□□□ -1.06
RTN4Q9NQC3 ADAM3A-206ENST00000484602 1046 ntTSL 2 BASIC8.44□□□□□ -1.06
RTN4Q9NQC3 AC026826.1-201ENST00000493002 361 ntBASIC8.44□□□□□ -1.06
RTN4Q9NQC3 RNU6-1045P-201ENST00000516321 107 ntBASIC8.44□□□□□ -1.06
RTN4Q9NQC3 RN7SKP60-201ENST00000516985 239 ntBASIC8.44□□□□□ -1.06
RTN4Q9NQC3 Y_RNA.718-201ENST00000517110 102 ntBASIC8.44□□□□□ -1.06
RTN4Q9NQC3 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC8.44□□□□□ -1.06
RTN4Q9NQC3 ERHP1-201ENST00000523006 310 ntBASIC8.44□□□□□ -1.06
RTN4Q9NQC3 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC8.44□□□□□ -1.06
RTN4Q9NQC3 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC8.44□□□□□ -1.06
RTN4Q9NQC3 HNRNPA1P67-201ENST00000604027 926 ntBASIC8.44□□□□□ -1.06
RTN4Q9NQC3 RPL17P3-201ENST00000605695 525 ntBASIC8.44□□□□□ -1.06
RTN4Q9NQC3 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC8.44□□□□□ -1.06
RTN4Q9NQC3 SSX9-202ENST00000608568 580 ntTSL 4 BASIC8.44□□□□□ -1.06
RTN4Q9NQC3 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
RTN4Q9NQC3 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
RTN4Q9NQC3 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
RTN4Q9NQC3 SDAD1P2-201ENST00000441308 2028 ntBASIC8.44□□□□□ -1.06
RTN4Q9NQC3 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
RTN4Q9NQC3 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
RTN4Q9NQC3 AC011504.1-201ENST00000623331 4103 ntBASIC8.44□□□□□ -1.06
RTN4Q9NQC3 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
RTN4Q9NQC3 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC8.43□□□□□ -1.06
RTN4Q9NQC3 Z73965.1-201ENST00000623412 2297 ntBASIC8.43□□□□□ -1.06
RTN4Q9NQC3 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RTN4Q9NQC3 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC8.43□□□□□ -1.06
RTN4Q9NQC3 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC8.43□□□□□ -1.06
RTN4Q9NQC3 AC007938.2-201ENST00000604666 2634 ntBASIC8.43□□□□□ -1.06
RTN4Q9NQC3 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
RTN4Q9NQC3 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
RTN4Q9NQC3 RN7SKP50-201ENST00000364694 315 ntBASIC8.43□□□□□ -1.06
RTN4Q9NQC3 SNORA4.3-201ENST00000365564 137 ntBASIC8.43□□□□□ -1.06
RTN4Q9NQC3 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RTN4Q9NQC3 Y_RNA.394-201ENST00000383942 103 ntBASIC8.43□□□□□ -1.06
RTN4Q9NQC3 RNA5SP219-201ENST00000390940 113 ntBASIC8.43□□□□□ -1.06
RTN4Q9NQC3 AL360182.1-201ENST00000397433 468 ntBASIC8.43□□□□□ -1.06
RTN4Q9NQC3 UBE2V1P2-201ENST00000397758 440 ntBASIC8.43□□□□□ -1.06
RTN4Q9NQC3 MIR548F5-201ENST00000408421 86 ntBASIC8.43□□□□□ -1.06
RTN4Q9NQC3 SSXP9-201ENST00000417503 292 ntBASIC8.43□□□□□ -1.06
RTN4Q9NQC3 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
RTN4Q9NQC3 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC8.43□□□□□ -1.06
RTN4Q9NQC3 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC8.43□□□□□ -1.06
RTN4Q9NQC3 AL161454.1-201ENST00000446226 569 ntBASIC8.43□□□□□ -1.06
RTN4Q9NQC3 AC020550.1-201ENST00000447385 163 ntBASIC8.43□□□□□ -1.06
RTN4Q9NQC3 AC008264.1-201ENST00000447612 367 ntBASIC8.43□□□□□ -1.06
RTN4Q9NQC3 RPS11P1-201ENST00000451072 473 ntBASIC8.43□□□□□ -1.06
RTN4Q9NQC3 AL031727.1-201ENST00000457263 455 ntBASIC8.43□□□□□ -1.06
RTN4Q9NQC3 DNAJC9-AS1-203ENST00000457758 548 ntTSL 3 BASIC8.43□□□□□ -1.06
RTN4Q9NQC3 RNU7-167P-201ENST00000459160 62 ntBASIC8.43□□□□□ -1.06
RTN4Q9NQC3 AC108161.1-201ENST00000461060 402 ntBASIC8.43□□□□□ -1.06
RTN4Q9NQC3 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
RTN4Q9NQC3 RPS27AP13-201ENST00000498403 237 ntBASIC8.43□□□□□ -1.06
RTN4Q9NQC3 SCARNA20.1-201ENST00000516009 138 ntBASIC8.43□□□□□ -1.06
RTN4Q9NQC3 RNA5SP454-201ENST00000517231 127 ntBASIC8.43□□□□□ -1.06
RTN4Q9NQC3 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC8.43□□□□□ -1.06
RTN4Q9NQC3 AC005230.1-201ENST00000555418 285 ntBASIC8.43□□□□□ -1.06
RTN4Q9NQC3 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC8.43□□□□□ -1.06
RTN4Q9NQC3 AC023043.2-201ENST00000589678 1026 ntBASIC8.43□□□□□ -1.06
RTN4Q9NQC3 AC006504.6-201ENST00000590142 199 ntBASIC8.43□□□□□ -1.06
RTN4Q9NQC3 ZNF493-205ENST00000596302 546 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
RTN4Q9NQC3 AC104662.1-201ENST00000604448 511 ntBASIC8.43□□□□□ -1.06
RTN4Q9NQC3 AC019278.1-201ENST00000623516 479 ntBASIC8.43□□□□□ -1.06
RTN4Q9NQC3 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC8.43□□□□□ -1.06
RTN4Q9NQC3 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC8.43□□□□□ -1.06
RTN4Q9NQC3 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RTN4Q9NQC3 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RTN4Q9NQC3 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
RTN4Q9NQC3 LRRC37A12P-201ENST00000454917 1801 ntBASIC8.43□□□□□ -1.06
RTN4Q9NQC3 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RTN4Q9NQC3 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RTN4Q9NQC3 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC8.42□□□□□ -1.06
RTN4Q9NQC3 CLCA3P-203ENST00000490028 2781 ntBASIC8.42□□□□□ -1.06
RTN4Q9NQC3 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC8.42□□□□□ -1.06
RTN4Q9NQC3 DMD-222ENST00000474231 5209 ntTSL 5 BASIC8.42□□□□□ -1.06
RTN4Q9NQC3 KRTAP6-2-201ENST00000334897 313 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
RTN4Q9NQC3 IL37-205ENST00000353225 652 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms