Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC115286.1-201ENST00000604298 434 ntBASIC4.52□□□□□ -1.69
PCDH9Q9HC56 MIR6820-201ENST00000611508 62 ntBASIC4.52□□□□□ -1.69
PCDH9Q9HC56 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
PCDH9Q9HC56 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.52□□□□□ -1.69
PCDH9Q9HC56 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDH9Q9HC56 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDH9Q9HC56 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
PCDH9Q9HC56 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.52□□□□□ -1.69
PCDH9Q9HC56 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.52□□□□□ -1.69
PCDH9Q9HC56 MTND4P10-201ENST00000446199 1363 ntBASIC4.52□□□□□ -1.69
PCDH9Q9HC56 AC111188.2-201ENST00000529697 1387 ntBASIC4.52□□□□□ -1.69
PCDH9Q9HC56 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PCDH9Q9HC56 MFSD8-242ENST00000641690 4199 ntBASIC4.51□□□□□ -1.69
PCDH9Q9HC56 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.51□□□□□ -1.69
PCDH9Q9HC56 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PCDH9Q9HC56 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PCDH9Q9HC56 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PCDH9Q9HC56 RNU6-984P-201ENST00000363236 109 ntBASIC4.51□□□□□ -1.69
PCDH9Q9HC56 RNU6-353P-201ENST00000364266 108 ntBASIC4.51□□□□□ -1.69
PCDH9Q9HC56 RNU6-98P-201ENST00000384173 107 ntBASIC4.51□□□□□ -1.69
PCDH9Q9HC56 MIR525-201ENST00000384978 85 ntBASIC4.51□□□□□ -1.69
PCDH9Q9HC56 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PCDH9Q9HC56 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDH9Q9HC56 RPL6P29-201ENST00000414863 865 ntBASIC4.51□□□□□ -1.69
PCDH9Q9HC56 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.51□□□□□ -1.69
PCDH9Q9HC56 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.51□□□□□ -1.69
PCDH9Q9HC56 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDH9Q9HC56 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.51□□□□□ -1.69
PCDH9Q9HC56 AC245028.1-201ENST00000423259 256 ntBASIC4.51□□□□□ -1.69
PCDH9Q9HC56 C1DP1-201ENST00000426049 402 ntBASIC4.51□□□□□ -1.69
PCDH9Q9HC56 HIGD1AP12-201ENST00000427832 281 ntBASIC4.51□□□□□ -1.69
PCDH9Q9HC56 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDH9Q9HC56 AC068135.1-201ENST00000446164 246 ntBASIC4.51□□□□□ -1.69
PCDH9Q9HC56 AL162388.1-201ENST00000450912 352 ntBASIC4.51□□□□□ -1.69
PCDH9Q9HC56 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.51□□□□□ -1.69
PCDH9Q9HC56 MTND2P28-201ENST00000457540 1044 ntBASIC4.51□□□□□ -1.69
PCDH9Q9HC56 RPL21P126-201ENST00000470049 478 ntBASIC4.51□□□□□ -1.69
PCDH9Q9HC56 AC093534.1-201ENST00000504977 132 ntBASIC4.51□□□□□ -1.69
PCDH9Q9HC56 AC008565.1-201ENST00000509046 885 ntBASIC4.51□□□□□ -1.69
PCDH9Q9HC56 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PCDH9Q9HC56 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PCDH9Q9HC56 PRELID3BP4-201ENST00000515476 571 ntBASIC4.51□□□□□ -1.69
PCDH9Q9HC56 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDH9Q9HC56 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.51□□□□□ -1.69
PCDH9Q9HC56 CR383656.6-201ENST00000550518 394 ntBASIC4.51□□□□□ -1.69
PCDH9Q9HC56 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDH9Q9HC56 POLR2KP1-201ENST00000553226 168 ntBASIC4.51□□□□□ -1.69
PCDH9Q9HC56 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDH9Q9HC56 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDH9Q9HC56 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.51□□□□□ -1.69
PCDH9Q9HC56 AC009097.3-201ENST00000563557 1018 ntBASIC4.51□□□□□ -1.69
PCDH9Q9HC56 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PCDH9Q9HC56 AC018552.3-201ENST00000567416 561 ntBASIC4.51□□□□□ -1.69
PCDH9Q9HC56 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDH9Q9HC56 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDH9Q9HC56 NIFKP6-201ENST00000598115 845 ntBASIC4.51□□□□□ -1.69
PCDH9Q9HC56 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDH9Q9HC56 VN1R74P-201ENST00000613259 503 ntBASIC4.51□□□□□ -1.69
PCDH9Q9HC56 SNX18P1Y-201ENST00000616231 511 ntBASIC4.51□□□□□ -1.69
PCDH9Q9HC56 AC009237.17-201ENST00000618111 748 ntBASIC4.51□□□□□ -1.69
PCDH9Q9HC56 AC010975.3-201ENST00000618727 978 ntBASIC4.51□□□□□ -1.69
PCDH9Q9HC56 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.51□□□□□ -1.69
PCDH9Q9HC56 AP002791.1-201ENST00000623291 381 ntBASIC4.51□□□□□ -1.69
PCDH9Q9HC56 AC120349.3-201ENST00000624377 529 ntBASIC4.51□□□□□ -1.69
PCDH9Q9HC56 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.51□□□□□ -1.69
PCDH9Q9HC56 CU459211.1-201ENST00000635667 749 ntBASIC4.51□□□□□ -1.69
PCDH9Q9HC56 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PCDH9Q9HC56 BX649567.1-201ENST00000642071 1134 ntBASIC4.51□□□□□ -1.69
PCDH9Q9HC56 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDH9Q9HC56 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.51□□□□□ -1.69
PCDH9Q9HC56 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDH9Q9HC56 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.51□□□□□ -1.69
PCDH9Q9HC56 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDH9Q9HC56 PHKBP1-201ENST00000450951 1951 ntBASIC4.51□□□□□ -1.69
PCDH9Q9HC56 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.51□□□□□ -1.69
PCDH9Q9HC56 AC010329.2-201ENST00000595195 2737 ntBASIC4.51□□□□□ -1.69
PCDH9Q9HC56 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.51□□□□□ -1.69
PCDH9Q9HC56 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PCDH9Q9HC56 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PCDH9Q9HC56 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
PCDH9Q9HC56 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PCDH9Q9HC56 RNU6-636P-201ENST00000384598 107 ntBASIC4.5□□□□□ -1.69
PCDH9Q9HC56 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PCDH9Q9HC56 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDH9Q9HC56 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDH9Q9HC56 MIR1303-201ENST00000408625 86 ntBASIC4.5□□□□□ -1.69
PCDH9Q9HC56 RPS7P9-201ENST00000414704 586 ntBASIC4.5□□□□□ -1.69
PCDH9Q9HC56 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.5□□□□□ -1.69
PCDH9Q9HC56 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.5□□□□□ -1.69
PCDH9Q9HC56 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.5□□□□□ -1.69
PCDH9Q9HC56 RPS26P30-201ENST00000443431 335 ntBASIC4.5□□□□□ -1.69
PCDH9Q9HC56 AL589880.1-201ENST00000448271 287 ntBASIC4.5□□□□□ -1.69
PCDH9Q9HC56 MTCO2P6-201ENST00000463134 685 ntBASIC4.5□□□□□ -1.69
PCDH9Q9HC56 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.5□□□□□ -1.69
PCDH9Q9HC56 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.5□□□□□ -1.69
PCDH9Q9HC56 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.5□□□□□ -1.69
PCDH9Q9HC56 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.5□□□□□ -1.69
PCDH9Q9HC56 AC108471.1-201ENST00000513977 287 ntBASIC4.5□□□□□ -1.69
PCDH9Q9HC56 RNA5SP154-201ENST00000516193 111 ntBASIC4.5□□□□□ -1.69
PCDH9Q9HC56 IGKV2D-10-201ENST00000520194 281 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms