Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 C17orf62-215ENST00000578913 563 ntTSL 2 BASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 MIR3689B-201ENST00000581772 148 ntBASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 TMCC1-AS1-202ENST00000604747 413 ntTSL 5 BASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 LINC01669-203ENST00000624105 505 ntTSL 5 BASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 CU638689.3-201ENST00000624266 1031 ntBASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 PSME2-218ENST00000630027 185 ntTSL 3 BASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 U6.111-201ENST00000636093 83 ntBASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 KLHL6-201ENST00000341319 6298 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 LOXHD1-207ENST00000441551 6226 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 MAPK10-347ENST00000641762 2856 ntBASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 MIR4435-2HG-202ENST00000371162 2044 ntBASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 SH3BP2-201ENST00000356331 9211 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 SLC6A4-201ENST00000261707 6604 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 OPTN-204ENST00000378752 3488 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 TRIM23-201ENST00000231524 4186 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 LARGE-AS1-203ENST00000438159 2618 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 STRADA-226ENST00000638276 1865 ntTSL 5 BASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 AFF2-205ENST00000370460 13746 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 FMN1-203ENST00000558197 4060 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 AC004076.2-201ENST00000620532 3323 ntBASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 RAP2C-205ENST00000620646 3341 ntTSL 5 BASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 TNIK-203ENST00000357327 3996 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 TIAM2-203ENST00000360366 5771 ntTSL 5 BASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 GRIA1-201ENST00000285900 5708 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 LPAR6-202ENST00000378434 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 C1orf198-202ENST00000427697 3666 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 COL5A2-201ENST00000374866 6949 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 CSTF1-201ENST00000217109 4290 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 DENND5B-203ENST00000536562 4291 ntTSL 2 BASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 AC025283.2-203ENST00000618352 2905 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 GYG2-209ENST00000639373 2900 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 EIF1AD-201ENST00000312234 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP3-3Q9BYR6 ZNF662-204ENST00000440367 4099 ntTSL 2 BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 CNIH4-202ENST00000366857 3963 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 LRRC7-204ENST00000415775 3996 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 C17orf75-201ENST00000225805 4581 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 ARMC9-214ENST00000611582 5759 ntTSL 5 BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 HSBP1-201ENST00000433866 8784 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 DNASE1-202ENST00000407479 8552 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 E2F3-202ENST00000535432 4425 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 BTBD7-202ENST00000334746 8430 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 USP35-201ENST00000526425 3770 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 COL6A4P1-202ENST00000487147 4317 ntBASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 TECPR2-203ENST00000558678 4281 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 AL034546.1-201ENST00000623740 3693 ntBASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 SLC12A3-203ENST00000563236 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 SCYL3-203ENST00000367772 3090 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 THBS4-204ENST00000511733 3094 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 MAGI2-236ENST00000637441 5822 ntTSL 5 BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 NRP1-212ENST00000432372 4137 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 CUX1-206ENST00000437600 3031 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 RGS4-204ENST00000421743 3311 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 SNORA80C-201ENST00000362917 135 ntBASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 RN7SKP231-201ENST00000363281 277 ntBASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 MIR518F-201ENST00000384973 87 ntBASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 RNU6-1307P-201ENST00000391012 103 ntBASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 ELOB-203ENST00000409906 991 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 RPS21P8-201ENST00000413365 247 ntBASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 AC109638.1-201ENST00000417406 326 ntBASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 RPL35AP31-201ENST00000418340 337 ntBASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 AL590383.1-201ENST00000428602 75 ntBASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 DDX39A-203ENST00000454233 922 ntTSL 3 BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 NPAP1P2-201ENST00000456716 1234 ntBASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 NXT1P1-201ENST00000458481 316 ntBASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 MRPL55-223ENST00000459783 694 ntTSL 5 BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 RN7SL658P-201ENST00000463595 303 ntBASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 CUTA-213ENST00000494751 731 ntTSL 5 BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 snoU109.6-201ENST00000516831 118 ntBASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 CD3D-204ENST00000529594 422 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 AC127070.4-201ENST00000536775 385 ntBASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 AC009120.3-201ENST00000563335 499 ntBASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 Metazoa_SRP.204-201ENST00000611908 247 ntBASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 RN7SL428P-201ENST00000613848 247 ntBASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 AC126755.6-201ENST00000615944 111 ntBASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 AC008740.2-201ENST00000617918 110 ntBASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 RN7SL331P-201ENST00000618054 247 ntBASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 U1.30-201ENST00000622285 165 ntBASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 AC096920.2-201ENST00000624711 339 ntTSL 4 BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 ZNF544-220ENST00000627781 383 ntTSL 2 BASIC4.82□□□□□ -1.64
KRTAP3-3Q9BYR6 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms