Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 WBP1LP4-201ENST00000505043 344 ntBASIC5.53□□□□□ -1.52
NUP88Q99567 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.53□□□□□ -1.52
NUP88Q99567 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.53□□□□□ -1.52
NUP88Q99567 RNU6-513P-201ENST00000516104 104 ntBASIC5.53□□□□□ -1.52
NUP88Q99567 RNA5SP249-201ENST00000516127 99 ntBASIC5.53□□□□□ -1.52
NUP88Q99567 RNU6-1225P-201ENST00000516336 65 ntBASIC5.53□□□□□ -1.52
NUP88Q99567 RN7SKP96-201ENST00000516948 297 ntBASIC5.53□□□□□ -1.52
NUP88Q99567 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.53□□□□□ -1.52
NUP88Q99567 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.53□□□□□ -1.52
NUP88Q99567 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NUP88Q99567 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.53□□□□□ -1.52
NUP88Q99567 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.53□□□□□ -1.52
NUP88Q99567 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
NUP88Q99567 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.53□□□□□ -1.52
NUP88Q99567 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NUP88Q99567 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.53□□□□□ -1.52
NUP88Q99567 MIR4715-201ENST00000584117 79 ntBASIC5.53□□□□□ -1.52
NUP88Q99567 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.53□□□□□ -1.52
NUP88Q99567 RPL26P30-202ENST00000602923 645 ntBASIC5.53□□□□□ -1.52
NUP88Q99567 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.53□□□□□ -1.52
NUP88Q99567 VIS1.1-201ENST00000610517 203 ntBASIC5.53□□□□□ -1.52
NUP88Q99567 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.53□□□□□ -1.52
NUP88Q99567 MIR4278-201ENST00000636094 69 ntBASIC5.53□□□□□ -1.52
NUP88Q99567 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NUP88Q99567 DHX40P1-201ENST00000588725 1412 ntBASIC5.53□□□□□ -1.52
NUP88Q99567 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
NUP88Q99567 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.53□□□□□ -1.52
NUP88Q99567 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NUP88Q99567 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NUP88Q99567 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
NUP88Q99567 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NUP88Q99567 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
NUP88Q99567 SMG1P6-201ENST00000532337 2930 ntBASIC5.52□□□□□ -1.53
NUP88Q99567 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.52□□□□□ -1.53
NUP88Q99567 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
NUP88Q99567 DBF4P1-201ENST00000412976 1892 ntBASIC5.52□□□□□ -1.53
NUP88Q99567 AC012321.1-201ENST00000561622 1588 ntBASIC5.52□□□□□ -1.53
NUP88Q99567 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
NUP88Q99567 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NUP88Q99567 FAM3C2-201ENST00000312214 681 ntBASIC5.52□□□□□ -1.53
NUP88Q99567 RNU5D-1-201ENST00000363299 116 ntBASIC5.52□□□□□ -1.53
NUP88Q99567 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
NUP88Q99567 U3.22-201ENST00000391120 215 ntBASIC5.52□□□□□ -1.53
NUP88Q99567 AL139098.1-201ENST00000407291 389 ntBASIC5.52□□□□□ -1.53
NUP88Q99567 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.52□□□□□ -1.53
NUP88Q99567 RNU6-757P-201ENST00000410334 100 ntBASIC5.52□□□□□ -1.53
NUP88Q99567 MTND4P22-201ENST00000413116 1169 ntBASIC5.52□□□□□ -1.53
NUP88Q99567 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NUP88Q99567 P2RY10P2-201ENST00000416730 913 ntBASIC5.52□□□□□ -1.53
NUP88Q99567 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.52□□□□□ -1.53
NUP88Q99567 AC009480.2-201ENST00000422916 432 ntBASIC5.52□□□□□ -1.53
NUP88Q99567 RPL23AP1-201ENST00000428990 471 ntBASIC5.52□□□□□ -1.53
NUP88Q99567 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.52□□□□□ -1.53
NUP88Q99567 MTND1P32-201ENST00000433043 938 ntBASIC5.52□□□□□ -1.53
NUP88Q99567 SETP8-201ENST00000435341 628 ntBASIC5.52□□□□□ -1.53
NUP88Q99567 RPL12P18-201ENST00000437175 325 ntBASIC5.52□□□□□ -1.53
NUP88Q99567 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NUP88Q99567 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.52□□□□□ -1.53
NUP88Q99567 AC239809.1-201ENST00000450470 217 ntBASIC5.52□□□□□ -1.53
NUP88Q99567 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.52□□□□□ -1.53
NUP88Q99567 RNA5SP103-201ENST00000459503 118 ntBASIC5.52□□□□□ -1.53
NUP88Q99567 PPIAP21-201ENST00000464473 501 ntBASIC5.52□□□□□ -1.53
NUP88Q99567 AC010307.1-201ENST00000467206 836 ntBASIC5.52□□□□□ -1.53
NUP88Q99567 RN7SL809P-201ENST00000482040 297 ntBASIC5.52□□□□□ -1.53
NUP88Q99567 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NUP88Q99567 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.52□□□□□ -1.53
NUP88Q99567 MTCYBP16-201ENST00000509187 1129 ntBASIC5.52□□□□□ -1.53
NUP88Q99567 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.52□□□□□ -1.53
NUP88Q99567 RPL23AP53-201ENST00000521854 457 ntBASIC5.52□□□□□ -1.53
NUP88Q99567 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.52□□□□□ -1.53
NUP88Q99567 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.52□□□□□ -1.53
NUP88Q99567 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.52□□□□□ -1.53
NUP88Q99567 ELOCP32-201ENST00000548625 324 ntBASIC5.52□□□□□ -1.53
NUP88Q99567 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.52□□□□□ -1.53
NUP88Q99567 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.52□□□□□ -1.53
NUP88Q99567 AC008088.1-201ENST00000580993 280 ntBASIC5.52□□□□□ -1.53
NUP88Q99567 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.52□□□□□ -1.53
NUP88Q99567 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.52□□□□□ -1.53
NUP88Q99567 MIR5096-201ENST00000583713 70 ntBASIC5.52□□□□□ -1.53
NUP88Q99567 AC017100.2-201ENST00000584628 355 ntBASIC5.52□□□□□ -1.53
NUP88Q99567 NF1P5-201ENST00000588287 448 ntBASIC5.52□□□□□ -1.53
NUP88Q99567 AC093765.1-201ENST00000603758 881 ntBASIC5.52□□□□□ -1.53
NUP88Q99567 AC023158.2-201ENST00000614876 543 ntBASIC5.52□□□□□ -1.53
NUP88Q99567 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC5.52□□□□□ -1.53
NUP88Q99567 BNIP3P41-202ENST00000616656 861 ntBASIC5.52□□□□□ -1.53
NUP88Q99567 AP003072.4-201ENST00000624580 310 ntBASIC5.52□□□□□ -1.53
NUP88Q99567 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.52□□□□□ -1.53
NUP88Q99567 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NUP88Q99567 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NUP88Q99567 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.52□□□□□ -1.53
NUP88Q99567 MAPK10-263ENST00000641052 4307 ntBASIC5.52□□□□□ -1.53
NUP88Q99567 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NUP88Q99567 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.51□□□□□ -1.53
NUP88Q99567 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.51□□□□□ -1.53
NUP88Q99567 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.51□□□□□ -1.53
NUP88Q99567 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NUP88Q99567 RPL32P3-201ENST00000359025 275 ntBASIC5.51□□□□□ -1.53
NUP88Q99567 SNORD113.2-201ENST00000364166 89 ntBASIC5.51□□□□□ -1.53
NUP88Q99567 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
NUP88Q99567 MFSD13B-201ENST00000420133 1290 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms