Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC062016.2-201ENST00000420950 676 ntBASIC4.31□□□□□ -1.72
VPS33AQ96AX1 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.31□□□□□ -1.72
VPS33AQ96AX1 AC096632.1-201ENST00000427395 310 ntBASIC4.31□□□□□ -1.72
VPS33AQ96AX1 AC073335.1-201ENST00000427776 363 ntBASIC4.31□□□□□ -1.72
VPS33AQ96AX1 IFNNP1-201ENST00000429219 553 ntBASIC4.31□□□□□ -1.72
VPS33AQ96AX1 PPIAP17-201ENST00000438507 471 ntBASIC4.31□□□□□ -1.72
VPS33AQ96AX1 OR2AF1P-201ENST00000454899 889 ntBASIC4.31□□□□□ -1.72
VPS33AQ96AX1 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS33AQ96AX1 AC005726.1-201ENST00000494679 427 ntBASIC4.31□□□□□ -1.72
VPS33AQ96AX1 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS33AQ96AX1 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS33AQ96AX1 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
VPS33AQ96AX1 AC104057.1-201ENST00000515547 497 ntBASIC4.31□□□□□ -1.72
VPS33AQ96AX1 RNU6-1028P-201ENST00000517164 93 ntBASIC4.31□□□□□ -1.72
VPS33AQ96AX1 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VPS33AQ96AX1 OR5BC1P-201ENST00000529327 739 ntBASIC4.31□□□□□ -1.72
VPS33AQ96AX1 OR4C2P-201ENST00000530855 1064 ntBASIC4.31□□□□□ -1.72
VPS33AQ96AX1 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.31□□□□□ -1.72
VPS33AQ96AX1 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.31□□□□□ -1.72
VPS33AQ96AX1 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.31□□□□□ -1.72
VPS33AQ96AX1 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VPS33AQ96AX1 AC090330.1-201ENST00000588646 764 ntBASIC4.31□□□□□ -1.72
VPS33AQ96AX1 ELOCP28-201ENST00000590044 317 ntBASIC4.31□□□□□ -1.72
VPS33AQ96AX1 AC073091.2-201ENST00000603205 907 ntBASIC4.31□□□□□ -1.72
VPS33AQ96AX1 AL160290.3-201ENST00000604869 165 ntBASIC4.31□□□□□ -1.72
VPS33AQ96AX1 AL445222.1-201ENST00000607259 628 ntBASIC4.31□□□□□ -1.72
VPS33AQ96AX1 AL354760.1-201ENST00000608357 643 ntBASIC4.31□□□□□ -1.72
VPS33AQ96AX1 AC020634.1-201ENST00000608701 549 ntBASIC4.31□□□□□ -1.72
VPS33AQ96AX1 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VPS33AQ96AX1 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
VPS33AQ96AX1 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.31□□□□□ -1.72
VPS33AQ96AX1 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
VPS33AQ96AX1 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VPS33AQ96AX1 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS33AQ96AX1 MTND4P9-201ENST00000507819 1346 ntBASIC4.3□□□□□ -1.72
VPS33AQ96AX1 PNPT1P2-201ENST00000456768 2050 ntBASIC4.3□□□□□ -1.72
VPS33AQ96AX1 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS33AQ96AX1 RNU6-441P-201ENST00000384545 106 ntBASIC4.3□□□□□ -1.72
VPS33AQ96AX1 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.3□□□□□ -1.72
VPS33AQ96AX1 AL139098.1-201ENST00000407291 389 ntBASIC4.3□□□□□ -1.72
VPS33AQ96AX1 RN7SKP213-201ENST00000410746 298 ntBASIC4.3□□□□□ -1.72
VPS33AQ96AX1 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.3□□□□□ -1.72
VPS33AQ96AX1 RAD23BP1-201ENST00000421404 1227 ntBASIC4.3□□□□□ -1.72
VPS33AQ96AX1 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.3□□□□□ -1.72
VPS33AQ96AX1 AC012497.1-201ENST00000429392 575 ntBASIC4.3□□□□□ -1.72
VPS33AQ96AX1 PSMD10P3-201ENST00000437000 448 ntBASIC4.3□□□□□ -1.72
VPS33AQ96AX1 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.3□□□□□ -1.72
VPS33AQ96AX1 RPL23AP33-201ENST00000442301 452 ntBASIC4.3□□□□□ -1.72
VPS33AQ96AX1 AC016724.1-201ENST00000453215 421 ntBASIC4.3□□□□□ -1.72
VPS33AQ96AX1 AC025674.1-201ENST00000507074 324 ntBASIC4.3□□□□□ -1.72
VPS33AQ96AX1 AC006499.6-201ENST00000511169 607 ntBASIC4.3□□□□□ -1.72
VPS33AQ96AX1 AC007016.1-201ENST00000512110 244 ntBASIC4.3□□□□□ -1.72
VPS33AQ96AX1 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.3□□□□□ -1.72
VPS33AQ96AX1 RNU4-60P-201ENST00000517239 135 ntBASIC4.3□□□□□ -1.72
VPS33AQ96AX1 IGLVIV-53-201ENST00000520107 367 ntBASIC4.3□□□□□ -1.72
VPS33AQ96AX1 NDUFS5P6-201ENST00000529136 295 ntBASIC4.3□□□□□ -1.72
VPS33AQ96AX1 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VPS33AQ96AX1 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.3□□□□□ -1.72
VPS33AQ96AX1 AL110118.1-201ENST00000553543 400 ntBASIC4.3□□□□□ -1.72
VPS33AQ96AX1 AC009117.1-201ENST00000563948 554 ntBASIC4.3□□□□□ -1.72
VPS33AQ96AX1 BNIP3P32-201ENST00000600015 554 ntBASIC4.3□□□□□ -1.72
VPS33AQ96AX1 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.3□□□□□ -1.72
VPS33AQ96AX1 AL136370.1-201ENST00000608166 691 ntBASIC4.3□□□□□ -1.72
VPS33AQ96AX1 AF129408.1-201ENST00000608767 431 ntBASIC4.3□□□□□ -1.72
VPS33AQ96AX1 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS33AQ96AX1 MIR6729-201ENST00000618194 65 ntBASIC4.3□□□□□ -1.72
VPS33AQ96AX1 AC103798.2-201ENST00000624292 632 ntBASIC4.3□□□□□ -1.72
VPS33AQ96AX1 AP003485.1-201ENST00000625093 753 ntBASIC4.3□□□□□ -1.72
VPS33AQ96AX1 U3.53-201ENST00000628922 216 ntBASIC4.3□□□□□ -1.72
VPS33AQ96AX1 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.3□□□□□ -1.72
VPS33AQ96AX1 IQCB2P-201ENST00000401788 1633 ntBASIC4.3□□□□□ -1.72
VPS33AQ96AX1 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.3□□□□□ -1.72
VPS33AQ96AX1 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS33AQ96AX1 MTND5P3-201ENST00000438536 1800 ntBASIC4.3□□□□□ -1.72
VPS33AQ96AX1 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS33AQ96AX1 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS33AQ96AX1 AC010300.1-201ENST00000600671 5134 ntBASIC4.29□□□□□ -1.72
VPS33AQ96AX1 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS33AQ96AX1 AC109780.1-201ENST00000451768 1344 ntBASIC4.29□□□□□ -1.72
VPS33AQ96AX1 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VPS33AQ96AX1 AC108467.2-201ENST00000617640 1597 ntBASIC4.29□□□□□ -1.72
VPS33AQ96AX1 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS33AQ96AX1 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
VPS33AQ96AX1 SNORA51.1-201ENST00000363243 140 ntBASIC4.29□□□□□ -1.72
VPS33AQ96AX1 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VPS33AQ96AX1 SNORA51.8-201ENST00000384234 132 ntBASIC4.29□□□□□ -1.72
VPS33AQ96AX1 SSXP10-201ENST00000402595 565 ntBASIC4.29□□□□□ -1.72
VPS33AQ96AX1 AC073264.1-201ENST00000411508 416 ntBASIC4.29□□□□□ -1.72
VPS33AQ96AX1 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS33AQ96AX1 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.29□□□□□ -1.72
VPS33AQ96AX1 COX6CP15-201ENST00000426313 211 ntBASIC4.29□□□□□ -1.72
VPS33AQ96AX1 NANOGP6-201ENST00000429190 847 ntBASIC4.29□□□□□ -1.72
VPS33AQ96AX1 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS33AQ96AX1 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS33AQ96AX1 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS33AQ96AX1 RPL6P9-201ENST00000466502 859 ntBASIC4.29□□□□□ -1.72
VPS33AQ96AX1 SUMO2P5-201ENST00000506790 245 ntBASIC4.29□□□□□ -1.72
VPS33AQ96AX1 HIGD1AP3-201ENST00000515857 278 ntBASIC4.29□□□□□ -1.72
VPS33AQ96AX1 RN7SKP276-201ENST00000516242 268 ntBASIC4.29□□□□□ -1.72
VPS33AQ96AX1 AC023632.1-201ENST00000518463 375 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms