Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 SETP6-201ENST00000479329 568 ntBASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 RPS26P15-201ENST00000488067 348 ntBASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 AL132838.2-201ENST00000492041 314 ntBASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 AC139783.2-201ENST00000504847 1145 ntBASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 AC017037.1-201ENST00000508460 471 ntBASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 MIR2116-201ENST00000517221 80 ntBASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 OR5M7P-201ENST00000526140 972 ntBASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 OR5AK3P-201ENST00000527486 1297 ntBASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 TOMM20P2-201ENST00000540082 421 ntBASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 AC106734.1-201ENST00000568646 663 ntBASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 TMF1P1-201ENST00000576058 373 ntBASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 MIR3160-1-201ENST00000577972 85 ntBASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 AC010200.2-201ENST00000605098 235 ntBASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 AC026741.1-201ENST00000605892 482 ntBASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 AC005014.3-201ENST00000605985 190 ntBASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 AC090948.2-201ENST00000607363 564 ntBASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 MIR6868-201ENST00000611215 58 ntBASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 AC078899.5-201ENST00000612475 178 ntBASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 RMST_10.1-201ENST00000616309 154 ntBASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 AL109620.1-201ENST00000618738 1197 ntBASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 AC009704.2-201ENST00000618739 483 ntBASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 AC253576.2-201ENST00000618815 580 ntBASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 DDX18P3-201ENST00000404856 2007 ntBASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 CASC19-261ENST00000641853 1638 ntBASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 AC107027.3-201ENST00000565095 3473 ntBASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 RNA5SP388-201ENST00000362584 119 ntBASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 SNORA63.3-201ENST00000362682 132 ntBASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 RNA5SP515-201ENST00000364570 118 ntBASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 RNA5SP479-201ENST00000364858 117 ntBASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 RNU4-6P-201ENST00000410804 122 ntBASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 TCEA1P4-201ENST00000415066 844 ntBASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 AL117339.2-201ENST00000430475 180 ntBASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 RPS24P8-201ENST00000431490 402 ntBASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 MTCO1P43-201ENST00000431831 488 ntBASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 AL031663.1-201ENST00000437445 219 ntBASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 GSTA7P-201ENST00000438425 448 ntBASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 AC092013.1-201ENST00000438795 332 ntBASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 CBX1P4-201ENST00000439415 457 ntBASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 AL162151.2-201ENST00000448875 158 ntBASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 RPL32P14-201ENST00000463196 378 ntBASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 AL161747.1-201ENST00000480068 358 ntBASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 AC025554.1-201ENST00000505641 188 ntBASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 AC121161.1-201ENST00000510606 652 ntBASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 AC108064.1-201ENST00000513791 460 ntBASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 HMGN1P15-201ENST00000513870 295 ntBASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 POLR2KP1-201ENST00000553226 168 ntBASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 AC110743.1-201ENST00000584870 478 ntBASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 AC012254.4-201ENST00000588843 273 ntBASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 MTATP6P2-201ENST00000603319 678 ntBASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 RNF6P1-201ENST00000444889 1784 ntBASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 AC027290.2-201ENST00000623210 18662 ntBASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 HSPD1P11-201ENST00000508643 1702 ntBASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 AL592494.2-201ENST00000425455 1548 ntBASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 MAPK10-253ENST00000641010 4072 ntBASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 AC026951.1-201ENST00000559530 2459 ntBASIC3.75□□□□□ -1.81
C9orf40Q8IXQ3 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
C9orf40Q8IXQ3 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms