Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC015871.5-202ENST00000623252 701 ntBASIC5.01□□□□□ -1.61
HERC6Q8IVU3 AP000770.2-201ENST00000623694 100 ntBASIC5.01□□□□□ -1.61
HERC6Q8IVU3 AP003072.4-201ENST00000624580 310 ntBASIC5.01□□□□□ -1.61
HERC6Q8IVU3 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.01□□□□□ -1.61
HERC6Q8IVU3 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.01□□□□□ -1.61
HERC6Q8IVU3 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.01□□□□□ -1.61
HERC6Q8IVU3 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.01□□□□□ -1.61
HERC6Q8IVU3 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
HERC6Q8IVU3 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HERC6Q8IVU3 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HERC6Q8IVU3 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
HERC6Q8IVU3 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
HERC6Q8IVU3 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
HERC6Q8IVU3 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5□□□□□ -1.61
HERC6Q8IVU3 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5□□□□□ -1.61
HERC6Q8IVU3 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HERC6Q8IVU3 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5□□□□□ -1.61
HERC6Q8IVU3 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5□□□□□ -1.61
HERC6Q8IVU3 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5□□□□□ -1.61
HERC6Q8IVU3 HMGB1P5-201ENST00000255320 642 ntBASIC5□□□□□ -1.61
HERC6Q8IVU3 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HERC6Q8IVU3 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5□□□□□ -1.61
HERC6Q8IVU3 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
HERC6Q8IVU3 AL590762.2-201ENST00000395798 571 ntBASIC5□□□□□ -1.61
HERC6Q8IVU3 VDAC2P1-201ENST00000399358 958 ntBASIC5□□□□□ -1.61
HERC6Q8IVU3 MIR1271-201ENST00000408537 86 ntBASIC5□□□□□ -1.61
HERC6Q8IVU3 RNA5SP317-201ENST00000410176 116 ntBASIC5□□□□□ -1.61
HERC6Q8IVU3 RNA5SP311-201ENST00000411290 116 ntBASIC5□□□□□ -1.61
HERC6Q8IVU3 CEACAMP8-201ENST00000413902 580 ntBASIC5□□□□□ -1.61
HERC6Q8IVU3 RPS3AP37-201ENST00000419176 745 ntBASIC5□□□□□ -1.61
HERC6Q8IVU3 AC027644.1-201ENST00000419595 298 ntBASIC5□□□□□ -1.61
HERC6Q8IVU3 C1DP1-201ENST00000426049 402 ntBASIC5□□□□□ -1.61
HERC6Q8IVU3 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5□□□□□ -1.61
HERC6Q8IVU3 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5□□□□□ -1.61
HERC6Q8IVU3 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5□□□□□ -1.61
HERC6Q8IVU3 RPL35AP21-201ENST00000437667 333 ntBASIC5□□□□□ -1.61
HERC6Q8IVU3 HMGB1P48-201ENST00000446155 598 ntBASIC5□□□□□ -1.61
HERC6Q8IVU3 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5□□□□□ -1.61
HERC6Q8IVU3 AC112492.1-201ENST00000449607 712 ntBASIC5□□□□□ -1.61
HERC6Q8IVU3 RPS6P2-201ENST00000454208 705 ntBASIC5□□□□□ -1.61
HERC6Q8IVU3 RN7SL98P-201ENST00000462271 300 ntBASIC5□□□□□ -1.61
HERC6Q8IVU3 UQCRHP4-201ENST00000471686 272 ntBASIC5□□□□□ -1.61
HERC6Q8IVU3 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5□□□□□ -1.61
HERC6Q8IVU3 AC113347.3-201ENST00000509113 148 ntBASIC5□□□□□ -1.61
HERC6Q8IVU3 RNU6-488P-201ENST00000515918 99 ntBASIC5□□□□□ -1.61
HERC6Q8IVU3 RNA5SP315-201ENST00000516340 116 ntBASIC5□□□□□ -1.61
HERC6Q8IVU3 RNA5SP312-201ENST00000517068 116 ntBASIC5□□□□□ -1.61
HERC6Q8IVU3 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5□□□□□ -1.61
HERC6Q8IVU3 RPL23AP53-201ENST00000521854 457 ntBASIC5□□□□□ -1.61
HERC6Q8IVU3 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5□□□□□ -1.61
HERC6Q8IVU3 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5□□□□□ -1.61
HERC6Q8IVU3 AP001317.1-201ENST00000531194 960 ntBASIC5□□□□□ -1.61
HERC6Q8IVU3 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5□□□□□ -1.61
HERC6Q8IVU3 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5□□□□□ -1.61
HERC6Q8IVU3 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5□□□□□ -1.61
HERC6Q8IVU3 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5□□□□□ -1.61
HERC6Q8IVU3 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5□□□□□ -1.61
HERC6Q8IVU3 MIR4716-201ENST00000579628 84 ntBASIC5□□□□□ -1.61
HERC6Q8IVU3 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5□□□□□ -1.61
HERC6Q8IVU3 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5□□□□□ -1.61
HERC6Q8IVU3 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5□□□□□ -1.61
HERC6Q8IVU3 AC243756.2-201ENST00000618406 463 ntBASIC5□□□□□ -1.61
HERC6Q8IVU3 AC008993.2-201ENST00000631744 806 ntBASIC5□□□□□ -1.61
HERC6Q8IVU3 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
HERC6Q8IVU3 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
HERC6Q8IVU3 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
HERC6Q8IVU3 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5□□□□□ -1.61
HERC6Q8IVU3 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5□□□□□ -1.61
HERC6Q8IVU3 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5□□□□□ -1.61
HERC6Q8IVU3 AC017104.4-201ENST00000636283 1592 ntBASIC4.99□□□□□ -1.61
HERC6Q8IVU3 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
HERC6Q8IVU3 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HERC6Q8IVU3 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.99□□□□□ -1.61
HERC6Q8IVU3 AC009643.2-201ENST00000603543 1448 ntBASIC4.99□□□□□ -1.61
HERC6Q8IVU3 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HERC6Q8IVU3 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.99□□□□□ -1.61
HERC6Q8IVU3 AC015813.6-201ENST00000624409 5808 ntBASIC4.99□□□□□ -1.61
HERC6Q8IVU3 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HERC6Q8IVU3 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.99□□□□□ -1.61
HERC6Q8IVU3 RNU1-13P-201ENST00000384499 162 ntBASIC4.99□□□□□ -1.61
HERC6Q8IVU3 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.99□□□□□ -1.61
HERC6Q8IVU3 SFR1P1-201ENST00000403720 688 ntBASIC4.99□□□□□ -1.61
HERC6Q8IVU3 AL359643.1-201ENST00000404109 423 ntBASIC4.99□□□□□ -1.61
HERC6Q8IVU3 AL512430.2-201ENST00000406786 339 ntBASIC4.99□□□□□ -1.61
HERC6Q8IVU3 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.99□□□□□ -1.61
HERC6Q8IVU3 AL451062.2-201ENST00000427515 271 ntBASIC4.99□□□□□ -1.61
HERC6Q8IVU3 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.99□□□□□ -1.61
HERC6Q8IVU3 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.99□□□□□ -1.61
HERC6Q8IVU3 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.99□□□□□ -1.61
HERC6Q8IVU3 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.99□□□□□ -1.61
HERC6Q8IVU3 EEF1A1P39-201ENST00000440791 250 ntBASIC4.99□□□□□ -1.61
HERC6Q8IVU3 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.99□□□□□ -1.61
HERC6Q8IVU3 RPL23AP44-201ENST00000482216 473 ntBASIC4.99□□□□□ -1.61
HERC6Q8IVU3 RPS27P23-201ENST00000487608 251 ntBASIC4.99□□□□□ -1.61
HERC6Q8IVU3 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.99□□□□□ -1.61
HERC6Q8IVU3 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HERC6Q8IVU3 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.99□□□□□ -1.61
HERC6Q8IVU3 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.99□□□□□ -1.61
HERC6Q8IVU3 AC107918.3-201ENST00000533272 382 ntBASIC4.99□□□□□ -1.61
HERC6Q8IVU3 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms