Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 AC091516.1-201ENST00000549191 703 ntBASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 AC137768.1-201ENST00000549998 553 ntBASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 AL109741.3-201ENST00000561748 592 ntBASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 MIR4715-201ENST00000584117 79 ntBASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 AC110792.4-201ENST00000609843 298 ntBASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 AC239803.2-201ENST00000610161 430 ntBASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 MIR6868-201ENST00000611215 58 ntBASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 AC012618.3-205ENST00000637896 1496 ntBASIC3.86□□□□□ -1.79
NUDCD3Q8IVD9 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 AC106871.1-201ENST00000568324 3102 ntBASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 IGKV7-3-201ENST00000357453 298 ntBASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 RNU6-317P-201ENST00000384031 107 ntBASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 MIR585-201ENST00000384887 94 ntBASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 NPM1P10-201ENST00000398310 865 ntBASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 RHEBP3-201ENST00000411920 351 ntBASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 MTND4LP14-201ENST00000429447 288 ntBASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 ACTR3P2-201ENST00000439585 1257 ntBASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 AL138878.2-201ENST00000440581 1241 ntBASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 AC009263.1-201ENST00000441193 1239 ntBASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 ANP32BP2-201ENST00000454525 545 ntBASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 snoU13.1-201ENST00000459157 104 ntBASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 RN7SL738P-201ENST00000470264 297 ntBASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 OR9N1P-202ENST00000494289 481 ntBASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 USP9YP5-201ENST00000511770 630 ntBASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 AC022790.1-201ENST00000522872 204 ntBASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 CYCSP29-201ENST00000533731 318 ntBASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 AC020910.2-201ENST00000603635 610 ntBASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 AC099669.2-201ENST00000616549 437 ntBASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 RPS4XP5-202ENST00000449995 1334 ntBASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NUDCD3Q8IVD9 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 RNA5SP366-201ENST00000365454 123 ntBASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 RNU4-31P-201ENST00000384211 141 ntBASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 RNU11-4P-201ENST00000391149 133 ntBASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 RPL23AP26-201ENST00000412728 464 ntBASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 LINC01881-201ENST00000416103 412 ntBASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 CR848007.2-201ENST00000424918 787 ntBASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 USP9YP7-201ENST00000436723 430 ntBASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 MED6P1-201ENST00000439659 713 ntBASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 CBX1P1-201ENST00000440184 427 ntBASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 RPS11P1-201ENST00000451072 473 ntBASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 AL513343.1-201ENST00000451818 792 ntBASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 USP9YP32-201ENST00000452432 430 ntBASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 RPS29P22-201ENST00000472363 168 ntBASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 AC087385.1-201ENST00000475062 312 ntBASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 AC013356.1-201ENST00000489027 564 ntBASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 AC108475.1-201ENST00000507880 950 ntBASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 RN7SKP209-201ENST00000516888 304 ntBASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 OR4A12P-201ENST00000530847 918 ntBASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 OR4U1P-201ENST00000554958 912 ntBASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms