Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 RNU6-609P-201ENST00000365459 107 ntBASIC3.84□□□□□ -1.79
NIPAL3Q6P499 MIR525-201ENST00000384978 85 ntBASIC3.84□□□□□ -1.79
NIPAL3Q6P499 PTGES3P2-201ENST00000407942 482 ntBASIC3.84□□□□□ -1.79
NIPAL3Q6P499 RNA5SP306-201ENST00000411087 107 ntBASIC3.84□□□□□ -1.79
NIPAL3Q6P499 JKAMPP1-201ENST00000413804 919 ntBASIC3.84□□□□□ -1.79
NIPAL3Q6P499 AL445183.3-201ENST00000414168 502 ntBASIC3.84□□□□□ -1.79
NIPAL3Q6P499 RPS12P5-201ENST00000423449 371 ntBASIC3.84□□□□□ -1.79
NIPAL3Q6P499 AL732292.1-201ENST00000426692 226 ntBASIC3.84□□□□□ -1.79
NIPAL3Q6P499 RPS29P17-201ENST00000430795 166 ntBASIC3.84□□□□□ -1.79
NIPAL3Q6P499 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.84□□□□□ -1.79
NIPAL3Q6P499 RPS3AP54-201ENST00000435535 734 ntBASIC3.84□□□□□ -1.79
NIPAL3Q6P499 RPL23AP52-201ENST00000439311 478 ntBASIC3.84□□□□□ -1.79
NIPAL3Q6P499 CBX1P1-201ENST00000440184 427 ntBASIC3.84□□□□□ -1.79
NIPAL3Q6P499 AC004865.1-201ENST00000442276 1003 ntBASIC3.84□□□□□ -1.79
NIPAL3Q6P499 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NIPAL3Q6P499 RPL23AP15-201ENST00000450202 459 ntBASIC3.84□□□□□ -1.79
NIPAL3Q6P499 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.84□□□□□ -1.79
NIPAL3Q6P499 SNORD108-201ENST00000459332 71 ntBASIC3.84□□□□□ -1.79
NIPAL3Q6P499 CYCSP20-201ENST00000473154 315 ntBASIC3.84□□□□□ -1.79
NIPAL3Q6P499 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.84□□□□□ -1.79
NIPAL3Q6P499 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.84□□□□□ -1.79
NIPAL3Q6P499 OR8G5-201ENST00000524943 1041 ntBASIC3.84□□□□□ -1.79
NIPAL3Q6P499 AP000916.1-201ENST00000533869 835 ntBASIC3.84□□□□□ -1.79
NIPAL3Q6P499 AC095057.3-201ENST00000567102 1157 ntBASIC3.84□□□□□ -1.79
NIPAL3Q6P499 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.84□□□□□ -1.79
NIPAL3Q6P499 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.84□□□□□ -1.79
NIPAL3Q6P499 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.84□□□□□ -1.79
NIPAL3Q6P499 AL354984.3-201ENST00000604803 325 ntBASIC3.84□□□□□ -1.79
NIPAL3Q6P499 AC112503.2-201ENST00000609005 552 ntBASIC3.84□□□□□ -1.79
NIPAL3Q6P499 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NIPAL3Q6P499 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.84□□□□□ -1.79
NIPAL3Q6P499 AC233309.1-201ENST00000619522 751 ntBASIC3.84□□□□□ -1.79
NIPAL3Q6P499 MIR7702-201ENST00000621931 59 ntBASIC3.84□□□□□ -1.79
NIPAL3Q6P499 AC067931.1-201ENST00000624190 671 ntBASIC3.84□□□□□ -1.79
NIPAL3Q6P499 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.84□□□□□ -1.79
NIPAL3Q6P499 FAM157B-203ENST00000639350 358 ntBASIC3.84□□□□□ -1.79
NIPAL3Q6P499 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.84□□□□□ -1.79
NIPAL3Q6P499 ZNF962P-201ENST00000443465 3140 ntBASIC3.84□□□□□ -1.79
NIPAL3Q6P499 AL512283.1-201ENST00000606756 1384 ntBASIC3.84□□□□□ -1.79
NIPAL3Q6P499 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
NIPAL3Q6P499 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.84□□□□□ -1.8
NIPAL3Q6P499 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
NIPAL3Q6P499 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
NIPAL3Q6P499 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
NIPAL3Q6P499 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
NIPAL3Q6P499 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.84□□□□□ -1.8
NIPAL3Q6P499 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
NIPAL3Q6P499 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.8
NIPAL3Q6P499 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.83□□□□□ -1.8
NIPAL3Q6P499 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NIPAL3Q6P499 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
NIPAL3Q6P499 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
NIPAL3Q6P499 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.83□□□□□ -1.8
NIPAL3Q6P499 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.83□□□□□ -1.8
NIPAL3Q6P499 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.83□□□□□ -1.8
NIPAL3Q6P499 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.83□□□□□ -1.8
NIPAL3Q6P499 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.83□□□□□ -1.8
NIPAL3Q6P499 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NIPAL3Q6P499 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.83□□□□□ -1.8
NIPAL3Q6P499 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
NIPAL3Q6P499 RN7SKP44-201ENST00000363602 316 ntBASIC3.83□□□□□ -1.8
NIPAL3Q6P499 RNA5SP509-201ENST00000364577 119 ntBASIC3.83□□□□□ -1.8
NIPAL3Q6P499 SNORA70E-201ENST00000384492 135 ntBASIC3.83□□□□□ -1.8
NIPAL3Q6P499 RNU2-21P-201ENST00000410368 188 ntBASIC3.83□□□□□ -1.8
NIPAL3Q6P499 RN7SKP177-201ENST00000410567 355 ntBASIC3.83□□□□□ -1.8
NIPAL3Q6P499 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.83□□□□□ -1.8
NIPAL3Q6P499 AC011933.1-201ENST00000413334 321 ntBASIC3.83□□□□□ -1.8
NIPAL3Q6P499 FTH1P6-201ENST00000430768 320 ntBASIC3.83□□□□□ -1.8
NIPAL3Q6P499 YWHAEP5-201ENST00000431545 765 ntBASIC3.83□□□□□ -1.8
NIPAL3Q6P499 RPL23AP89-201ENST00000439324 255 ntBASIC3.83□□□□□ -1.8
NIPAL3Q6P499 PPIAP3-201ENST00000450588 505 ntBASIC3.83□□□□□ -1.8
NIPAL3Q6P499 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NIPAL3Q6P499 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.83□□□□□ -1.8
NIPAL3Q6P499 RAD23BP3-201ENST00000454157 1152 ntBASIC3.83□□□□□ -1.8
NIPAL3Q6P499 snoU13.7-201ENST00000459220 104 ntBASIC3.83□□□□□ -1.8
NIPAL3Q6P499 AC116533.1-201ENST00000459748 321 ntBASIC3.83□□□□□ -1.8
NIPAL3Q6P499 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.83□□□□□ -1.8
NIPAL3Q6P499 AC087385.1-201ENST00000475062 312 ntBASIC3.83□□□□□ -1.8
NIPAL3Q6P499 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.83□□□□□ -1.8
NIPAL3Q6P499 AP000926.1-201ENST00000479573 241 ntBASIC3.83□□□□□ -1.8
NIPAL3Q6P499 RPS26P15-201ENST00000488067 348 ntBASIC3.83□□□□□ -1.8
NIPAL3Q6P499 PPM1AP1-201ENST00000502740 1135 ntBASIC3.83□□□□□ -1.8
NIPAL3Q6P499 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.83□□□□□ -1.8
NIPAL3Q6P499 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.83□□□□□ -1.8
NIPAL3Q6P499 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.83□□□□□ -1.8
NIPAL3Q6P499 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.83□□□□□ -1.8
NIPAL3Q6P499 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.83□□□□□ -1.8
NIPAL3Q6P499 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.83□□□□□ -1.8
NIPAL3Q6P499 MTND2P26-201ENST00000528255 1029 ntBASIC3.83□□□□□ -1.8
NIPAL3Q6P499 MIR6748-201ENST00000610433 71 ntBASIC3.83□□□□□ -1.8
NIPAL3Q6P499 MIR7641-1-201ENST00000627518 61 ntBASIC3.83□□□□□ -1.8
NIPAL3Q6P499 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.83□□□□□ -1.8
NIPAL3Q6P499 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NIPAL3Q6P499 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.83□□□□□ -1.8
NIPAL3Q6P499 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NIPAL3Q6P499 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
NIPAL3Q6P499 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NIPAL3Q6P499 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NIPAL3Q6P499 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
NIPAL3Q6P499 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms