Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC7.42□□□□□ -1.22
RC3H1Q5TC82 TRAV15-201ENST00000556680 249 ntBASIC7.42□□□□□ -1.22
RC3H1Q5TC82 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
RC3H1Q5TC82 AC079075.1-201ENST00000559543 878 ntBASIC7.42□□□□□ -1.22
RC3H1Q5TC82 MYL12BP1-201ENST00000569826 507 ntBASIC7.42□□□□□ -1.22
RC3H1Q5TC82 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RC3H1Q5TC82 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC7.42□□□□□ -1.22
RC3H1Q5TC82 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC7.42□□□□□ -1.22
RC3H1Q5TC82 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RC3H1Q5TC82 AC016251.2-201ENST00000623393 3089 ntBASIC7.42□□□□□ -1.22
RC3H1Q5TC82 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
RC3H1Q5TC82 AC105749.1-201ENST00000631338 2008 ntBASIC7.42□□□□□ -1.22
RC3H1Q5TC82 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RC3H1Q5TC82 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RC3H1Q5TC82 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RC3H1Q5TC82 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RC3H1Q5TC82 AC025574.1-201ENST00000554784 1653 ntBASIC7.41□□□□□ -1.22
RC3H1Q5TC82 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RC3H1Q5TC82 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.41□□□□□ -1.22
RC3H1Q5TC82 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.41□□□□□ -1.22
RC3H1Q5TC82 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC7.41□□□□□ -1.22
RC3H1Q5TC82 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RC3H1Q5TC82 AL662795.2-201ENST00000624252 3706 ntBASIC7.41□□□□□ -1.22
RC3H1Q5TC82 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
RC3H1Q5TC82 RNA5SP234-201ENST00000363916 119 ntBASIC7.41□□□□□ -1.22
RC3H1Q5TC82 RNU6-619P-201ENST00000365146 108 ntBASIC7.41□□□□□ -1.22
RC3H1Q5TC82 PARD3-204ENST00000374768 799 ntTSL 3 BASIC7.41□□□□□ -1.22
RC3H1Q5TC82 MIR223-201ENST00000385204 110 ntBASIC7.41□□□□□ -1.22
RC3H1Q5TC82 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RC3H1Q5TC82 FGFR1OP2P1-201ENST00000395943 500 ntBASIC7.41□□□□□ -1.22
RC3H1Q5TC82 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC7.41□□□□□ -1.22
RC3H1Q5TC82 AL357752.1-201ENST00000412817 349 ntBASIC7.41□□□□□ -1.22
RC3H1Q5TC82 RPL23AP27-201ENST00000415161 451 ntBASIC7.41□□□□□ -1.22
RC3H1Q5TC82 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.41□□□□□ -1.22
RC3H1Q5TC82 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC7.41□□□□□ -1.22
RC3H1Q5TC82 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC7.41□□□□□ -1.22
RC3H1Q5TC82 AC012512.1-201ENST00000446594 718 ntBASIC7.41□□□□□ -1.22
RC3H1Q5TC82 AC239798.3-201ENST00000454459 408 ntBASIC7.41□□□□□ -1.22
RC3H1Q5TC82 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC7.41□□□□□ -1.22
RC3H1Q5TC82 RPL32P33-201ENST00000487023 394 ntBASIC7.41□□□□□ -1.22
RC3H1Q5TC82 HIGD1AP14-201ENST00000507617 282 ntBASIC7.41□□□□□ -1.22
RC3H1Q5TC82 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC7.41□□□□□ -1.22
RC3H1Q5TC82 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC7.41□□□□□ -1.22
RC3H1Q5TC82 RNU6-1314P-201ENST00000517139 104 ntBASIC7.41□□□□□ -1.22
RC3H1Q5TC82 AC138832.1-201ENST00000522871 556 ntBASIC7.41□□□□□ -1.22
RC3H1Q5TC82 OR8A2P-201ENST00000528631 952 ntBASIC7.41□□□□□ -1.22
RC3H1Q5TC82 EIF4A2P5-201ENST00000529914 499 ntBASIC7.41□□□□□ -1.22
RC3H1Q5TC82 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC7.41□□□□□ -1.22
RC3H1Q5TC82 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC7.41□□□□□ -1.22
RC3H1Q5TC82 AC024940.4-201ENST00000605507 246 ntBASIC7.41□□□□□ -1.22
RC3H1Q5TC82 AP000654.2-201ENST00000605633 586 ntBASIC7.41□□□□□ -1.22
RC3H1Q5TC82 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC7.41□□□□□ -1.22
RC3H1Q5TC82 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC7.41□□□□□ -1.22
RC3H1Q5TC82 uc_338.22-201ENST00000622722 187 ntBASIC7.41□□□□□ -1.22
RC3H1Q5TC82 SRP54-214ENST00000630962 162 ntTSL 5 BASIC7.41□□□□□ -1.22
RC3H1Q5TC82 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.41□□□□□ -1.22
RC3H1Q5TC82 AL137058.3-201ENST00000624531 3099 ntBASIC7.41□□□□□ -1.22
RC3H1Q5TC82 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RC3H1Q5TC82 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RC3H1Q5TC82 MTCO1P14-201ENST00000441695 1559 ntBASIC7.41□□□□□ -1.22
RC3H1Q5TC82 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC7.41□□□□□ -1.22
RC3H1Q5TC82 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
RC3H1Q5TC82 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
RC3H1Q5TC82 ALB-209ENST00000503124 1741 ntTSL 5 BASIC7.41□□□□□ -1.22
RC3H1Q5TC82 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
RC3H1Q5TC82 AL161756.3-201ENST00000641216 2071 ntBASIC7.4□□□□□ -1.22
RC3H1Q5TC82 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
RC3H1Q5TC82 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RC3H1Q5TC82 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.4□□□□□ -1.22
RC3H1Q5TC82 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RC3H1Q5TC82 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RC3H1Q5TC82 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC7.4□□□□□ -1.22
RC3H1Q5TC82 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RC3H1Q5TC82 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
RC3H1Q5TC82 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.4□□□□□ -1.22
RC3H1Q5TC82 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
RC3H1Q5TC82 DEFB109C-201ENST00000382575 264 ntBASIC7.4□□□□□ -1.22
RC3H1Q5TC82 DEFB109B-201ENST00000382656 264 ntBASIC7.4□□□□□ -1.22
RC3H1Q5TC82 SNORA11C-201ENST00000408532 129 ntBASIC7.4□□□□□ -1.22
RC3H1Q5TC82 SLC35E1P1-201ENST00000419313 864 ntBASIC7.4□□□□□ -1.22
RC3H1Q5TC82 AL133173.1-201ENST00000423458 397 ntBASIC7.4□□□□□ -1.22
RC3H1Q5TC82 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RC3H1Q5TC82 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC7.4□□□□□ -1.22
RC3H1Q5TC82 AC023141.8-201ENST00000442554 208 ntBASIC7.4□□□□□ -1.22
RC3H1Q5TC82 RPL17P49-201ENST00000443728 411 ntBASIC7.4□□□□□ -1.22
RC3H1Q5TC82 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC7.4□□□□□ -1.22
RC3H1Q5TC82 AL450023.1-201ENST00000450868 751 ntBASIC7.4□□□□□ -1.22
RC3H1Q5TC82 RNU7-152P-201ENST00000458982 64 ntBASIC7.4□□□□□ -1.22
RC3H1Q5TC82 RN7SL570P-201ENST00000484405 292 ntBASIC7.4□□□□□ -1.22
RC3H1Q5TC82 PCBP2P3-201ENST00000509726 843 ntBASIC7.4□□□□□ -1.22
RC3H1Q5TC82 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC7.4□□□□□ -1.22
RC3H1Q5TC82 SNORA40.12-201ENST00000516329 111 ntBASIC7.4□□□□□ -1.22
RC3H1Q5TC82 RNU6-406P-201ENST00000516470 107 ntBASIC7.4□□□□□ -1.22
RC3H1Q5TC82 SNORA25.17-201ENST00000517184 124 ntBASIC7.4□□□□□ -1.22
RC3H1Q5TC82 AC139365.2-201ENST00000517972 253 ntBASIC7.4□□□□□ -1.22
RC3H1Q5TC82 PSMA2P1-201ENST00000526365 646 ntBASIC7.4□□□□□ -1.22
RC3H1Q5TC82 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC7.4□□□□□ -1.22
RC3H1Q5TC82 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC7.4□□□□□ -1.22
RC3H1Q5TC82 AC087763.1-201ENST00000603391 286 ntBASIC7.4□□□□□ -1.22
RC3H1Q5TC82 CYP2C61P-201ENST00000604072 290 ntBASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms