Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 snoU109.5-201ENST00000516231 132 ntBASIC5.39□□□□□ -1.55
ATF4P18848 RNU6-358P-201ENST00000516564 75 ntBASIC5.39□□□□□ -1.55
ATF4P18848 AC090572.1-201ENST00000519251 160 ntBASIC5.39□□□□□ -1.55
ATF4P18848 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.39□□□□□ -1.55
ATF4P18848 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.39□□□□□ -1.55
ATF4P18848 OR4T1P-201ENST00000554933 911 ntBASIC5.39□□□□□ -1.55
ATF4P18848 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.39□□□□□ -1.55
ATF4P18848 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC5.39□□□□□ -1.55
ATF4P18848 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.39□□□□□ -1.55
ATF4P18848 HMGB1P6-201ENST00000569046 646 ntBASIC5.39□□□□□ -1.55
ATF4P18848 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.39□□□□□ -1.55
ATF4P18848 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC5.39□□□□□ -1.55
ATF4P18848 GLYATL1P2-202ENST00000588046 902 ntBASIC5.39□□□□□ -1.55
ATF4P18848 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.39□□□□□ -1.55
ATF4P18848 BNIP3P30-201ENST00000601184 574 ntBASIC5.39□□□□□ -1.55
ATF4P18848 AC024451.4-201ENST00000602578 752 ntBASIC5.39□□□□□ -1.55
ATF4P18848 AL023806.2-201ENST00000603042 263 ntBASIC5.39□□□□□ -1.55
ATF4P18848 AL022394.1-201ENST00000606979 292 ntBASIC5.39□□□□□ -1.55
ATF4P18848 AL158211.4-201ENST00000606988 584 ntBASIC5.39□□□□□ -1.55
ATF4P18848 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC5.39□□□□□ -1.55
ATF4P18848 TUG1_1.1-201ENST00000610654 145 ntBASIC5.39□□□□□ -1.55
ATF4P18848 AL020991.1-201ENST00000612314 373 ntBASIC5.39□□□□□ -1.55
ATF4P18848 AC009033.1-201ENST00000624279 431 ntBASIC5.39□□□□□ -1.55
ATF4P18848 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC5.39□□□□□ -1.55
ATF4P18848 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
ATF4P18848 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ATF4P18848 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC5.39□□□□□ -1.55
ATF4P18848 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ATF4P18848 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ATF4P18848 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ATF4P18848 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ATF4P18848 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.39□□□□□ -1.55
ATF4P18848 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
ATF4P18848 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.39□□□□□ -1.55
ATF4P18848 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATF4P18848 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATF4P18848 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATF4P18848 Y_RNA.303-201ENST00000364998 94 ntBASIC5.38□□□□□ -1.55
ATF4P18848 ARMCX7P-201ENST00000372828 562 ntBASIC5.38□□□□□ -1.55
ATF4P18848 RNU6-432P-201ENST00000384196 109 ntBASIC5.38□□□□□ -1.55
ATF4P18848 RNA5SP296-201ENST00000410523 111 ntBASIC5.38□□□□□ -1.55
ATF4P18848 RN7SKP247-201ENST00000411094 308 ntBASIC5.38□□□□□ -1.55
ATF4P18848 JKAMPP1-201ENST00000413804 919 ntBASIC5.38□□□□□ -1.55
ATF4P18848 AC009237.5-201ENST00000414271 501 ntBASIC5.38□□□□□ -1.55
ATF4P18848 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.38□□□□□ -1.55
ATF4P18848 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.38□□□□□ -1.55
ATF4P18848 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ATF4P18848 CALM1P1-201ENST00000442082 433 ntBASIC5.38□□□□□ -1.55
ATF4P18848 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.38□□□□□ -1.55
ATF4P18848 UBBP5-201ENST00000446970 266 ntBASIC5.38□□□□□ -1.55
ATF4P18848 MTND5P20-201ENST00000448677 143 ntBASIC5.38□□□□□ -1.55
ATF4P18848 PPIAP3-201ENST00000450588 505 ntBASIC5.38□□□□□ -1.55
ATF4P18848 NANOGP10-201ENST00000453325 895 ntBASIC5.38□□□□□ -1.55
ATF4P18848 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.38□□□□□ -1.55
ATF4P18848 AC069439.1-201ENST00000494739 167 ntBASIC5.38□□□□□ -1.55
ATF4P18848 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC5.38□□□□□ -1.55
ATF4P18848 RPL7L1P7-201ENST00000509986 724 ntBASIC5.38□□□□□ -1.55
ATF4P18848 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC5.38□□□□□ -1.55
ATF4P18848 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.38□□□□□ -1.55
ATF4P18848 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.38□□□□□ -1.55
ATF4P18848 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.38□□□□□ -1.55
ATF4P18848 IGKV1D-32-201ENST00000517449 318 ntBASIC5.38□□□□□ -1.55
ATF4P18848 EEF1B2P2-201ENST00000519625 676 ntBASIC5.38□□□□□ -1.55
ATF4P18848 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.38□□□□□ -1.55
ATF4P18848 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.38□□□□□ -1.55
ATF4P18848 AL133271.1-201ENST00000538229 291 ntBASIC5.38□□□□□ -1.55
ATF4P18848 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC5.38□□□□□ -1.55
ATF4P18848 AC090022.1-201ENST00000546569 311 ntBASIC5.38□□□□□ -1.55
ATF4P18848 NDUFA3P4-201ENST00000560814 250 ntBASIC5.38□□□□□ -1.55
ATF4P18848 EEF1B2P1-201ENST00000567221 672 ntBASIC5.38□□□□□ -1.55
ATF4P18848 AC027796.1-201ENST00000575593 512 ntBASIC5.38□□□□□ -1.55
ATF4P18848 MIR744-201ENST00000578242 98 ntBASIC5.38□□□□□ -1.55
ATF4P18848 MIR1273F-201ENST00000580581 99 ntBASIC5.38□□□□□ -1.55
ATF4P18848 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC5.38□□□□□ -1.55
ATF4P18848 AL589765.5-201ENST00000596133 515 ntBASIC5.38□□□□□ -1.55
ATF4P18848 AC006254.3-201ENST00000603353 884 ntBASIC5.38□□□□□ -1.55
ATF4P18848 IGHV3-29-201ENST00000604817 344 ntBASIC5.38□□□□□ -1.55
ATF4P18848 AC010680.4-201ENST00000605334 543 ntBASIC5.38□□□□□ -1.55
ATF4P18848 AC092681.3-201ENST00000609463 678 ntBASIC5.38□□□□□ -1.55
ATF4P18848 BX323046.1-201ENST00000610145 535 ntBASIC5.38□□□□□ -1.55
ATF4P18848 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
ATF4P18848 AC063943.3-201ENST00000615562 356 ntBASIC5.38□□□□□ -1.55
ATF4P18848 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5.38□□□□□ -1.55
ATF4P18848 AC092794.2-201ENST00000620933 563 ntBASIC5.38□□□□□ -1.55
ATF4P18848 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.38□□□□□ -1.55
ATF4P18848 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5.38□□□□□ -1.55
ATF4P18848 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATF4P18848 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.38□□□□□ -1.55
ATF4P18848 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ATF4P18848 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATF4P18848 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATF4P18848 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC5.38□□□□□ -1.55
ATF4P18848 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATF4P18848 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATF4P18848 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ATF4P18848 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
ATF4P18848 DDX18P3-201ENST00000404856 2007 ntBASIC5.38□□□□□ -1.55
ATF4P18848 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ATF4P18848 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
ATF4P18848 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms