Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC006480.1-201ENST00000449887 378 ntBASIC6.05□□□□□ -1.44
PDGFAP04085 RNU6-329P-201ENST00000459618 107 ntBASIC6.05□□□□□ -1.44
PDGFAP04085 AC007547.1-201ENST00000462177 490 ntBASIC6.05□□□□□ -1.44
PDGFAP04085 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.05□□□□□ -1.44
PDGFAP04085 AC021220.1-201ENST00000507445 630 ntBASIC6.05□□□□□ -1.44
PDGFAP04085 AC114797.1-201ENST00000514003 728 ntBASIC6.05□□□□□ -1.44
PDGFAP04085 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.05□□□□□ -1.44
PDGFAP04085 AC105417.1-201ENST00000514691 285 ntBASIC6.05□□□□□ -1.44
PDGFAP04085 RNA5SP418-201ENST00000515951 117 ntBASIC6.05□□□□□ -1.44
PDGFAP04085 RNU4-49P-201ENST00000516080 140 ntBASIC6.05□□□□□ -1.44
PDGFAP04085 IGKV2-19-201ENST00000518132 283 ntBASIC6.05□□□□□ -1.44
PDGFAP04085 AC008429.2-201ENST00000523057 864 ntBASIC6.05□□□□□ -1.44
PDGFAP04085 AC024224.1-201ENST00000538284 609 ntBASIC6.05□□□□□ -1.44
PDGFAP04085 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.05□□□□□ -1.44
PDGFAP04085 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC6.05□□□□□ -1.44
PDGFAP04085 SCOCP1-201ENST00000554676 349 ntBASIC6.05□□□□□ -1.44
PDGFAP04085 RPL21P12-201ENST00000559810 515 ntBASIC6.05□□□□□ -1.44
PDGFAP04085 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC6.05□□□□□ -1.44
PDGFAP04085 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC6.05□□□□□ -1.44
PDGFAP04085 UBE2L4-201ENST00000587688 464 ntBASIC6.05□□□□□ -1.44
PDGFAP04085 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.05□□□□□ -1.44
PDGFAP04085 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC6.05□□□□□ -1.44
PDGFAP04085 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.05□□□□□ -1.44
PDGFAP04085 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDGFAP04085 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.05□□□□□ -1.44
PDGFAP04085 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
PDGFAP04085 RBPJP7-201ENST00000442803 1447 ntBASIC6.05□□□□□ -1.44
PDGFAP04085 RBPJP5-201ENST00000449433 1447 ntBASIC6.05□□□□□ -1.44
PDGFAP04085 AC006511.3-201ENST00000624929 1783 ntBASIC6.05□□□□□ -1.44
PDGFAP04085 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDGFAP04085 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
PDGFAP04085 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDGFAP04085 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PDGFAP04085 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PDGFAP04085 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDGFAP04085 AC105114.1-201ENST00000624795 1862 ntBASIC6.05□□□□□ -1.44
PDGFAP04085 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDGFAP04085 PANDAR-201ENST00000629595 1506 ntBASIC6.04□□□□□ -1.44
PDGFAP04085 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.04□□□□□ -1.44
PDGFAP04085 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDGFAP04085 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.04□□□□□ -1.44
PDGFAP04085 AL592148.3-201ENST00000608771 2646 ntBASIC6.04□□□□□ -1.44
PDGFAP04085 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDGFAP04085 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PDGFAP04085 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
PDGFAP04085 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.04□□□□□ -1.44
PDGFAP04085 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.04□□□□□ -1.44
PDGFAP04085 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.04□□□□□ -1.44
PDGFAP04085 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDGFAP04085 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDGFAP04085 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.04□□□□□ -1.44
PDGFAP04085 Y_RNA.231-201ENST00000364358 102 ntBASIC6.04□□□□□ -1.44
PDGFAP04085 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.04□□□□□ -1.44
PDGFAP04085 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC6.04□□□□□ -1.44
PDGFAP04085 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.04□□□□□ -1.44
PDGFAP04085 CHEK2P3-201ENST00000416118 248 ntBASIC6.04□□□□□ -1.44
PDGFAP04085 AL645937.1-202ENST00000421799 937 ntBASIC6.04□□□□□ -1.44
PDGFAP04085 PSMA6P3-201ENST00000428242 164 ntBASIC6.04□□□□□ -1.44
PDGFAP04085 PNKDP1-201ENST00000435914 430 ntBASIC6.04□□□□□ -1.44
PDGFAP04085 AC092013.1-201ENST00000438795 332 ntBASIC6.04□□□□□ -1.44
PDGFAP04085 BRK1P2-201ENST00000442875 223 ntBASIC6.04□□□□□ -1.44
PDGFAP04085 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.04□□□□□ -1.44
PDGFAP04085 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC6.04□□□□□ -1.44
PDGFAP04085 AC073415.1-201ENST00000449240 153 ntBASIC6.04□□□□□ -1.44
PDGFAP04085 CFL1P4-201ENST00000451536 498 ntBASIC6.04□□□□□ -1.44
PDGFAP04085 SETP20-201ENST00000457046 852 ntBASIC6.04□□□□□ -1.44
PDGFAP04085 AL136126.1-201ENST00000473603 402 ntBASIC6.04□□□□□ -1.44
PDGFAP04085 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.04□□□□□ -1.44
PDGFAP04085 AC021382.1-201ENST00000483523 359 ntBASIC6.04□□□□□ -1.44
PDGFAP04085 RPS4XP23-201ENST00000487801 237 ntBASIC6.04□□□□□ -1.44
PDGFAP04085 H3F3AP3-201ENST00000497682 407 ntBASIC6.04□□□□□ -1.44
PDGFAP04085 AC104109.1-201ENST00000498563 436 ntBASIC6.04□□□□□ -1.44
PDGFAP04085 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC6.04□□□□□ -1.44
PDGFAP04085 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.04□□□□□ -1.44
PDGFAP04085 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC6.04□□□□□ -1.44
PDGFAP04085 AC093853.1-201ENST00000515689 483 ntBASIC6.04□□□□□ -1.44
PDGFAP04085 RNU4-29P-201ENST00000515943 174 ntBASIC6.04□□□□□ -1.44
PDGFAP04085 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.04□□□□□ -1.44
PDGFAP04085 CYCSP25-201ENST00000525280 316 ntBASIC6.04□□□□□ -1.44
PDGFAP04085 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.04□□□□□ -1.44
PDGFAP04085 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.04□□□□□ -1.44
PDGFAP04085 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC6.04□□□□□ -1.44
PDGFAP04085 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC6.04□□□□□ -1.44
PDGFAP04085 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.04□□□□□ -1.44
PDGFAP04085 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.04□□□□□ -1.44
PDGFAP04085 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.04□□□□□ -1.44
PDGFAP04085 AL159972.1-201ENST00000625150 448 ntBASIC6.04□□□□□ -1.44
PDGFAP04085 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PDGFAP04085 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDGFAP04085 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PDGFAP04085 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDGFAP04085 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDGFAP04085 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
PDGFAP04085 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
PDGFAP04085 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PDGFAP04085 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDGFAP04085 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDGFAP04085 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDGFAP04085 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDGFAP04085 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms